Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_012530.1 Length=142111 Score E Sequences producing significant alignments: (Bits) Value seq4076 87.8 2e-12 >seq4076 Length=1650 Score = 87.8 bits (96), Expect = 2e-12 Identities = 132/184 (72%), Gaps = 8/184 (4%) Strand=Plus/Plus Query 36907 CTAACCTTTTTATCAACATCTTTTGCCCAAGATGGTAAAAGCAAAATAGGAATATCTAAC 36966 |||| | ||| || ||||||||| ||||| |||||||| | | || | ||||| Sbjct 919 CTAATATGTTTTTCTGCATCTTTTGTCCAAGCTGGTAAAAATAGCACGGGCAAGTCTAAT 978 Query 36967 AAAATAATATATGTTGCTTGTAGAACTACGTCATTG---TAATTTTTAGCCCCTACCGCA 37023 | || |||||| | ||| || | ||| || |||| ||||||||||| || || | Sbjct 979 AGAAAAATATAGGCTGCCTGCAAAACAAC---ATTGGCATAATTTTTAGCATATATCGAA 1035 Query 37024 ACAATAATGTAAATGATCG-CGCTAATTAATCCAAACATACCATTAACGGGTCGTGCATT 37082 |||||||||||||| || | | ||| ||| || || | ||| |||| |||| |||||| Sbjct 1036 ACAATAATGTAAATAATTGATGATAA-TAAGCCCAATACACCGTTAATCGGTCTTGCATT 1094 Query 37083 TGTA 37086 ||| Sbjct 1095 AGTA 1098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 454582044153360