Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_013598.1 Length=35525 Score E Sequences producing significant alignments: (Bits) Value seq6528 80.6 6e-11 >seq6528 Length=1832 Score = 80.6 bits (88), Expect = 6e-11 Identities = 102/138 (74%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 29008 TTCACTGAAGGAATTGACCTGCCAAACGTTGA-TGTTTGCATCATGTTAAGACCAACTCA 29066 || || ||||| ||||| | || || ||||| || | |||||| ||||||||| Sbjct 328 TTTACCGAAGGTGTTGACTTACCCAATGTTGACTGCGTA-ATCATGGCAAGACCAACCAC 270 Query 29067 ATCGTTATCACTCTATTTGCAGTTTGCCATGAGGGCTTTAAATCCAAGAGACGGTAAAAC 29126 ||| ||| |||| | ||| |||||| | |||||| ||||||||||||| || || || Sbjct 269 ATCATTAGCACTGTTTTTACAGTTTTCAATGAGGTGTTTAAATCCAAGACCTGGCAAGAC 210 Query 29127 AGCTATTATAATCGACCA 29144 || ||||| || ||||| Sbjct 209 TGCAATTATCATTGACCA 192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113547684771324