Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_013696.1 Length=42822 Score E Sequences producing significant alignments: (Bits) Value seq6632 122 2e-23 >seq6632 Length=1117 Score = 122 bits (134), Expect = 2e-23 Identities = 233/336 (69%), Gaps = 28/336 (8%) Strand=Plus/Minus Query 35824 AATACTTGATGCTTGCTGTGGTAGCAGA-ATGTTTTGGTTTGATAAGCAAAACGAACAAG 35882 ||| |||||||| |||||||| | || | |||||||||||| |||| ||| |||| | Sbjct 1015 AATTCTTGATGCATGCTGTGG-ATCAAAGATGTTTTGGTTTAATAA---AAATGAACCAC 960 Query 35883 TTTTG---TTTATGGACAAC---AGAGAACATTACGAAAAATTAGACAGTGGGCATGT-- 35934 | | | |||||||||| || || | | | || | |||| | | || | Sbjct 959 ATACGACATATATGGACAACCGTAGTGATCGTAATGAGTACAGAGACCGGGACTATATCC 900 Query 35935 ----TATCGATGTTAATCCTAATCTAGTTGCAGATTTTAGAAAGATGCCTTTTGAAGATA 35990 | | |||||||||| || | ||||| ||||||||||| ||||||||||| |||| Sbjct 899 GCTCTGTAATTGTTAATCCTGATATTGTTGCTGATTTTAGAAACATGCCTTTTGATGATA 840 Query 35991 ACTCGTTTTATCATGTTGTATTTGATCCTCCGCATTTATTGAGGTGTGGTAATAACAGCT 36050 || ||||| || || |||||||||||||||||||| | | || || | | Sbjct 839 ACACGTTTGATTTAGTAATATTTGATCCTCCGCATTTAATTAAAGCAGGCGATCA----T 784 Query 36051 GGTTGGCTAAA---AAATATGGCAAGCTAAAC--GAGAAAACTTGGAAAGAAGATATACA 36105 |||||||||| ||||||| || | | || || |||| ||||| | || | Sbjct 783 AGTTGGCTAAAGATGAATATGG--AGTTTTGCCTGAAGAAGATTGGCAAGAATACATCAA 726 Query 36106 AAAAGGTTTTCATGAGTGTATGAGGGTTTTGAAGCC 36141 |||||||||| ||||||| |||||||| || || || Sbjct 725 AAAAGGTTTTGATGAGTGCATGAGGGTATTAAAACC 690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136895881456768