Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_015252.1 Length=36953 Score E Sequences producing significant alignments: (Bits) Value seq4744 84.2 5e-12 >seq4744 Length=1121 Score = 84.2 bits (92), Expect = 5e-12 Identities = 195/293 (67%), Gaps = 1/293 (0%) Strand=Plus/Plus Query 24644 CCCAAAGCATTATTTGCCGATGCGGTATCAACTAGCCAAACGACTATTTTAGTCGGTGAA 24703 || ||||| ||||||| ||| | || ||| | || | ||||| ||||| |||||| Sbjct 495 CCTAAAGCTCTATTTGCAGATACAGTTTCAGCAAGTGATGACACTATCTTAGTTGGTGAA 554 Query 24704 CTTGCTAAGTTGCTTAAACAAAACGGGGTTGATATTGGCGCTACTCGATTATTCAAATGG 24763 ||||| ||| | | ||| || || || |||||||| | | | | || || ||| Sbjct 555 CTTGCCAAGATTTTGAAAGGCAAAGGTGTAAATATTGGCCAAAATAGGCTTTTTAAGTGG 614 Query 24764 CTACGTGATAACCAGTTCCTTATCAATAGAAGAGGTAGTGATTGGAATATGCCAACGCAG 24823 | |||||||| | | || || | || || ||||| | ||| | || || || Sbjct 615 ATGCGTGATAATGGCTATTTGATAAACCGGAGGGGCAGTGACCGCAATGTTCCGACTCAA 674 Query 24824 AAATCAATGAATATGAAGTTGTTTCAGATAAAAGAAACTAACATTCAGCATTCTGATGGT 24883 || || ||| | ||| | ||||||| |||||||| || | ||| |||||||| Sbjct 675 AAGTCTATGGAAATG-GGACTATTCAGATTAAAGAAACAGTAATCAATCATCCTGATGGT 733 Query 24884 CATGTATCTATTAGTAAAACAGCGAAAGTTACTGGTAAAGGGCAACAATATTT 24936 | | |||||| || || | ||||| ||||||||||| || | ||||| Sbjct 734 AAGCCAAGTATTAGAAAGACGCCAAAAGTAACTGGTAAAGGCCAGCGCTATTT 786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118116853589580