Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_015263.1 Length=114768 Score E Sequences producing significant alignments: (Bits) Value seq1694 102 6e-17 >seq1694 Length=8743 Score = 102 bits (112), Expect = 6e-17 Identities = 153/216 (71%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 56097 TATCTACCACAGGAAAATGAAGCAATTAATGATAAGTCAGGATATGCAAACTCTGTAATG 56156 ||| |||| |||||||||| |||||||||||||| || ||||| | || |||| Sbjct 5013 TATTTACCGCAGGAAAATGCTGCAATTAATGATAAAGAAGCGTATGCCGATTCAAAAATG 4954 Query 56157 ATTGCAGAAGCTGATACAAATGAACTATT---AAGTTCTGACTTTATTGTAGCTGTCTTA 56213 ||||| | || ||||| || | || | |||| || || || || || || | Sbjct 4953 ATTGCTCAGGCCGATACTGATAAGCTCCTTCAAAGT---GATTTAATGGTTGCCGTTCTT 4897 Query 56214 GACGGTGCAACAATTGATGTTGGTGTAGCTAGTGAAATTGGAGTTGCCTATGCTAAAGGC 56273 || ||| | |||||| ||| ||||| || ||||| || ||||||| ||||||| Sbjct 4896 GATGGTCTCAGTATTGATAATGGGGTAGCAAGCGAAATCGGTATTGCCTACGCTAAAGAA 4837 Query 56274 ATTCCAGTTATTGGTCTGTATTCAGATTCACGTCAA 56309 ||||| ||||||||||||| | ||| |||| ||| Sbjct 4836 ATTCCGATTATTGGTCTGTACACGGATACACGACAA 4801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 367097246171274