Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq1453 91.5 2e-13 >seq1453 Length=2861619 Score = 91.5 bits (100), Expect = 2e-13 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 153894 GCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGT 153953 ||||| | ||||| || || || |||| || ||||| || ||||||||||| ||||| Sbjct 1252258 GCATATCGCTTAGCTCTTCAAACACGAGAACAACATATTAGAAGAGACAAAGCTACCAGC 1252317 Query 153954 AACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCAT 154013 || || || || || || ||| | ||||| |||||||||| | | ||||| | ||| ||| Sbjct 1252318 AATATTTGTACTGCACAAGCATTACTGGCAAATATGTCTGCAATGTATGCTGTATACCAT 1252377 Query 154014 GGTGCAGATGGACTACATGCTATAGCAA 154041 || | || ||| || | ||| |||| Sbjct 1252378 GGACCTGAAGGAATAAAAAATATTGCAA 1252405 Score = 86.0 bits (94), Expect = 7e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 153288 TACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAA 153347 || || || |||||| | || || || || || ||| | |||| | |||| ||||| ||| Sbjct 1251598 TATACACCATATCAACCAGAAATTTCACAAGGCAGACTTGAAGGTCTATTGAATTATCAA 1251657 Query 153348 ACGCTCATCACAGAACTTACAGGATTACCAATAGCAAACGCATCTCTATTAGATGAAGCA 153407 || | || || | || ||| | |||||| ||||||||||| |||||||||| Sbjct 1251658 ACAATGATATGCGACTTAACTGGAATGGAAATAGCGAACGCATCTCTTTTAGATGAAGGC 1251717 Query 153408 ACTGCAGCAGCAGAAGC 153424 |||||||||||||| || Sbjct 1251718 ACTGCAGCAGCAGAGGC 1251734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579155269688640