Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq3297 109 1e-18 >seq3297 Length=1252 Score = 109 bits (120), Expect = 1e-18 Identities = 221/318 (69%), Gaps = 20/318 (6%) Strand=Plus/Plus Query 73797 GAACAAGGTATTTCTTTCACTGAATTTTCGTATCAAATTCTTCAAGCAATGGACTTTGAA 73856 ||| | |||||||| || ||||||||||| ||||||||| | || || || || ||| | Sbjct 321 GAAAATGGTATTTCATTTACTGAATTTTCATATCAAATTTTGCAGGCCATTGATTTTTAC 380 Query 73857 TATTTGTACGAAATGAATAAC----TGCA-AAATCCAAATTGGTGGTTCTGACCAATGGG 73911 | ||| ||| || ||| || |||| |||||||||||| ||||||||||| Sbjct 381 CAATTG-----AATAAAGAACACGGTGTTCAAATGCAAATTGGTGGTAGTGACCAATGGG 435 Query 73912 GTAATATGATTGCTGGAATTGATTTGATTCATAAAATCCACGGCAATGAT-GCAGACTGC 73970 | || || | || |||||||| |||||||||||| | || |||| || | || Sbjct 436 GCAACATTACGGCAGGAATTGACTTGATTCATAAATTATTGGGTTCTGATCGCCAA--GC 493 Query 73971 -GGTGTTATCACTATACCACTAGTTACT-AAATCTGATGGTACTAAATTTGGTAAATCAG 74028 || | | || || || | | | || ||| ||||||| ||||||||||||||||||| Sbjct 494 ATTTGGTTTGACCATTCC-GTTGATGCTAAAAGCTGATGGAACTAAATTTGGTAAATCAG 552 Query 74029 AATCTGGTACTATCTGG--TTAACTGAACAACGCACTACGCCATATCACTTCTTCCAGTT 74086 |||| || | ||| | | | | | || || | |||||| | |||| ||| || Sbjct 553 CCGGTGGTGCTGTTTGGCTTGATCCGGAAAA--GACCAGCCCATATGAGTTCTACCAATT 610 Query 74087 CTGGCGTAATCTAGATGA 74104 |||| || | |||||| Sbjct 611 CTGGATAAACCAAGATGA 628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147473565973108