Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_019449.1 Length=31841 Score E Sequences producing significant alignments: (Bits) Value seq4744 168 1e-37 >seq4744 Length=1121 Score = 168 bits (186), Expect = 1e-37 Identities = 308/449 (69%), Gaps = 4/449 (1%) Strand=Plus/Plus Query 27004 ATTAATGAGTCCGGCCTTTACAGCTTGATTTTGTCGAGCAAGTTGCCAACGGCTAAGGCG 27063 ||||| ||||| || || || ||||| ||| || ||||| |||| ||||||| | Sbjct 264 ATTAACGAGTCTGGTCTCTATAGCTTAATTATGAGTAGCAAAATGCCTGAGGCTAAGAGG 323 Query 27064 TTCAAACGTTGGGTAACCAGCAAAGTTCTTCCAGCAATTCGGAAGCATGGTGCTTATATG 27123 || |||| |||||| || || | || | ||||| ||| | ||||||| || || | Sbjct 324 TTTAAACATTGGGTTACAAGTGAGGTATTACCAGCTATTAGACAGCATGGAGCGTACCTT 383 Query 27124 ACAGACCAAAAAGCCTTCGATGTTGTTCATAACAAGAACGGGTTGATCGACCTGCTACAA 27183 || ||||| |||||||| ||| || || ||||||| |||| | | |||||| | Sbjct 384 ACTGACCAGAAAGCCTTGGATATTATTACTAACAAGGACGGCCTAGCTGGCCTGCTTAAG 443 Query 27184 CAAGCCGCTGACCAGCTGAGAGAAAAAGATGTTCAGATTGAGGAAATGAAGCCAAAAGCA 27243 ||||| ||||||||||| | |||||||| | || ||| || || | || ||||| Sbjct 444 CAAGCTGCTGACCAGCTTGAACAAAAAGATATCCAAATTAAGCGGTTGGAACCTAAAGCT 503 Query 27244 TTATTTGCTGATTCAGTTTCAGCCAGCGACTCAATGATCTTAATTCGTGATTTGGCTAAG 27303 ||||||| ||| |||||||||| || || | |||||| || |||| | || ||| Sbjct 504 CTATTTGCAGATACAGTTTCAGCAAGTGATGACACTATCTTAGTTGGTGAACTTGCCAAG 563 Query 27304 ATCCTTAACGGCAACGGCATTGACATTGGTGGTAATCGGTTATTCCAATGGTTAAGGGAT 27363 || | || ||||| || | | ||||| ||| || | || | ||| | | ||| Sbjct 564 ATTTTGAAAGGCAAAGGTGTAAATATTGGCCAAAATAGGCTTTTTAAGTGGATGCGTGAT 623 Query 27364 AACGGCTATCTCATTA---GCAACGTGAGCGACCGGAACATGCCAACTCAAAAGGCTATG 27420 || |||||| | || | | | | || ||||| || | || ||||||||| ||||| Sbjct 624 AATGGCTATTTGATAAACCGGAGGGGCAGTGACCGCAATGTTCCGACTCAAAAGTCTATG 683 Query 27421 AATTTAGGTCTTTTCAAGGTTAAGGAGAc 27449 | | || || ||| || |||| || || Sbjct 684 GAAATGGGACTATTC-AGATTAAAGAAAC 711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 101759997147756