Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_019489.1 Length=41726 Score E Sequences producing significant alignments: (Bits) Value seq1563 250 7e-62 >seq1563 Length=10698 Score = 250 bits (276), Expect = 7e-62 Identities = 566/836 (68%), Gaps = 30/836 (4%) Strand=Plus/Plus Query 6647 TTCCAAAATAAGAACCTTAACTTGTGGCTAGAACAATCGGTCGACAGCTTCTTAAAACTG 6706 || || ||||||| || || |||||| || | || || | ||||| |||||||||| Sbjct 2892 TTTCAGAATAAGACGCTAAATTTGTGGTTAAAGCAGTCCACCAGCAGCTACTTAAAACTG 2951 Query 6707 CCTGACGTTGAAAAAGCCATCG-TGCCATCATTT-AGTTTTGACGATCGGCAAGTTTATA 6764 | || || ||||| ||| | | || || |||| | |||||| ||| ||||| || | Sbjct 2952 CAAGATGTAGAAAATGCCGTTGATG--ATGATTTCAAAATTGACGGTCGTCAAGTATACA 3009 Query 6765 TTGGTTTTGACTACTCAATGTTTAGTGATAACACGGCGCTAGCGTTTGTATTCCCTTATC 6824 | || || || || ||||||||| || || || ||| | | ||||| | || |||| Sbjct 3010 TCGGCTTGGATTATTCAATGTTTTCGGACAATACAGCGATTGGTTTTGTTTATCCATATC 3069 Query 6825 GCGAT-AATAATGACAAACCACGATGGTTTATTTATCAGCATAGCTTTATTCCCTGGCAG 6883 || || || | || ||||||||| |||| ||| || || |||||||| ||||| Sbjct 3070 AAAATGAAGAAGGGCAG-CCACGATGGCATATTGCTCAACACAGTTTTATTCCGTGGCAA 3128 Query 6884 AAAGCTGGTTCGATTGAAGCTAAAGAAAAACAAGACGGTATTAATTATCGGGACTTAGCT 6943 |||| || ||| |||| ||||||||||| ||||| |||||| ||||| || || || Sbjct 3129 CAAGCCGGATCGCTTGAGGCTAAAGAAAAGCAAGATGGTATTGTTTATCATGAGTTTCCT 3188 Query 6944 AAAAAGGGATTTTGTACAATTAGTAGCCATCCGCAAGGACTGATTAATGACGAGCAGGTT 7003 | ||||||||||| | | ||| ||||| | |||||| || || ||| Sbjct 3189 ------GAGTTTTGTACAATCACTGCACATGAAAAAGGAATTATTAATCCAGAACAAGTT 3242 Query 7004 TATCAGTGGTTACTTAACTTTGTTGAACGGCATCGACTGGAA-GTTGTTTTCTTTGGCTA 7062 ||| | ||| | | ||| ||||||| || | | | || || |||||||||| || Sbjct 3243 TATAAATGGCTTTTAGACTATGTTGAAGAACA-CAATTTAAAGGTCATTTTCTTTGGATA 3301 Query 7063 TGACGCG---TGGGGGCTAACACCTACA----ATCA---AACAATTGGATTTGAATTCAG 7112 |||| || ||| | || || || | || | || || || ||| ||| Sbjct 3302 TGAC-CGTTTTGGCAGTTATCAGGTAAAGAATATTACTGAAAGCTTAAATGCCAATACAG 3360 Query 7113 GCTGGCCATTGCAAGCCATTCGGCAACGGACTAGTGAATTGAAGGATCCAACTAAGTTTT 7172 | ||| | | |||| ||| ||| |||| || || | |||| ||||| |||| Sbjct 3361 G-TGGTTAATTCAAGACATAGCACAAAGGACAAGCGAGCTTGCCAATCCTACTAAATTTT 3419 Query 7173 TGCAGACGATTTTTGTTGAAGGGTCAGTTGACCGATTCGATGATCGAATTATGGAAAAGG 7232 |||| | |||| | ||| | || ||| ||| | |||| ||| | ||||| | Sbjct 3420 TGCAAGAAAGCTTTGCTACCGGGAAAATTACCCGGTTCAACGATCCGATTTTAGAAAAAG 3479 Query 7233 CATTACTAAATGCTGAAATTTATGAAGACAAAATTGGTATTCAAGTCGATAAGGCTAAGG 7292 |||| || |||||| ||| | ||||| ||||| || || ||||| || |||| ||| | Sbjct 3480 CATTGCTTAATGCTTCTATTAAAGAAGATAAAATCGGGATACAAGTTGACAAGGATAAAG 3539 Query 7293 CCACGCTGAAAATTGATGTAGTTGATGCGCTAATTGACGCCTTATTCCAAGCCATGTATC 7352 | || || ||||||||||| |||||||| ||||||| || | | |||| ||| | | Sbjct 3540 CTACTCTAAAAATTGATGTGGTTGATGCATTAATTGATGCAATGTATCAAGGGATGAACC 3599 Query 7353 ACTTTGAAGACTTTTCAGATGTAAACAATCCTGATAAAC--AGGTTGAACGTATGAACGA 7410 | |||||| | | | | | | ||| || || || | || |||||||||| | Sbjct 3600 ATTTTGAAAAGTATGGAATTATCAACGAT--AAATCGACTGAAGTAGAACGTATGACGCA 3657 Query 7411 AAAACAAGTTCTAGAATGGTTTAATAACCCGGAGTCGGGATTGCTAGGAGATGATG 7466 | |||| ||||||| ||||||| | || || || || |||||| |||| | ||||| Sbjct 3658 AGAACAGGTTCTAGCATGGTTTGAAAATCCTGAATCCGGATTGTTAGGGGGTGATG 3713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133389012391776