Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq1453 116 4e-21 >seq1453 Length=2861619 Score = 116 bits (128), Expect = 4e-21 Identities = 115/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 139246 TTGCTATAGCATGTAGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTG 139305 |||| ||| | || ||| || | ||||| ||| | ||||| | | |||||||||||| Sbjct 1252405 TTGCAATATTTTTTATTCCTTCAGGTCCATGGTATACAGCATACATTGCAGACATATTTG 1252346 Query 139306 CGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCT 139365 | || | ||||||||| || || || || ||||| |||||||||||||||||||| || | Sbjct 1252345 CCAGTAATGCTTGTGCAGTACAAATATTGCTGGTAGCTTTGTCTCTTCTAATATGTTGTT 1252286 Query 139366 CTCTAGTTTGTAGTGCTAATCTGTATGCA 139394 ||| ||||| || ||||| | |||||| Sbjct 1252285 CTCGTGTTTGAAGAGCTAAGCGATATGCA 1252257 Score = 89.7 bits (98), Expect = 6e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 139863 GCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCCTGTA 139922 ||||||||||||||||| |||||||||| ||||||||||| |||||| | ||| || Sbjct 1251734 GCCTCTGCTGCTGCAGTGCCTTCATCTAAAAGAGATGCGTTCGCTATTTCCATTCCAGTT 1251675 Query 139923 AGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATATCTCA 139982 | || || | ||||| ||||| |||| | |||| | ||| || || || || || Sbjct 1251674 AAGTCGCATATCATTGTTTGATAATTCAATAGACCTTCAAGTCTGCCTTGTGAAATTTCT 1251615 Query 139983 GCTTGATAGGGAGTGTA 139999 | |||||| || || || Sbjct 1251614 GGTTGATATGGTGTATA 1251598 Score = 89.7 bits (98), Expect = 6e-13 Identities = 163/239 (68%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || |||||||| || | ||||| |||||||| || || || || || || || ||||| Sbjct 1253657 ACTCCAATAGGTCCCATTCCAGGTCCTCCACCGCCGTGAGGTATGCAAAACGTTTTATGC 1253598 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 || || ||||| | ||||| ||| || |||| ||| | || || || ||| Sbjct 1253597 AAGTTAAGATGTGAAACATCGCTACCGTAATCACCTGGACGACACAATCCAACTTGAGCA 1253538 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | || || ||||| | ||| || ||||||||| | ||||| || |||| || Sbjct 1253537 TTCATGTTGGCTCCATCTAAATACACTTGACCACCAGCTTTATGAATCATAGTACAAATA 1253478 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGA 138421 | || | |||||| || |||| || ||||||||||| ||||| | ||| || Sbjct 1253477 TCGGCAATAGTCTCTTCAAACACTCCATTTGTTGATGGATATGTTATCATTAAACAAGA 1253419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578940890983920