Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1429 95.1 1e-14 >seq1429 Length=9113309 Score = 95.1 bits (104), Expect = 1e-14 Identities = 234/350 (67%), Gaps = 4/350 (1%) Strand=Plus/Plus Query 75872 GATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTAC 75931 ||| | |||| |||||||| | || || || || ||||| |||||||||||||| Sbjct 7666328 GATTTATGGACAGCTATTCTTATTTCTCAAGTTGAAACAGGAACTCCATATATGCTTTAT 7666387 Query 75932 AAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAAT 75991 || ||| ||| || || || || | ||| | |||||||| ||||| ||| Sbjct 7666388 AAAGATCATTGCAATCGCAAATCAAATCATCAAAATATAGGAACAATAAAGAGTAGTAAT 7666447 Query 75992 CTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCA 76051 | || || ||| || | |||| | | ||||| ||||| || ||||| || Sbjct 7666448 TTATGTACAGAAGTTGTGCAGTATTCCAGTCCAGATGAAGTTGCTGTGTGTAATTTAGCT 7666507 Query 76052 TCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTT 76111 ||||| || || | || ||| ||| | | || || ||||||| | |||||||| Sbjct 7666508 TCAATTGCTGTTAATATGTTTGTAAATCCCAATAATCAAACATTTGATTTTCAAAAACTT 7666567 Query 76112 CATGAAA-TCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTA 76170 | ||||| | ||||| |||||||| ||||| || | | || || |||| ||| Sbjct 7666568 C-TGAAAGTAACAAAAATTGTTACTTGTAATCTCGACAAAATTATCGATGTCAATTATTA 7666626 Query 76171 TCCCGTT-GAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGT 76219 ||| || ||| ||| ||||||| ||| | |||| |||||||| ||| Sbjct 7666627 TCCTATTCCAGA-AGCGAGAAAGTCAAATTTTAGACATAGACCTATAGGT 7666675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596510345724480