Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_021806.1 Length=100418 Score E Sequences producing significant alignments: (Bits) Value seq596 93.3 3e-14 >seq596 Length=4103984 Score = 93.3 bits (102), Expect = 3e-14 Identities = 163/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 96160 GCTAATACTGTAGCTGTGGTTGTTCCATCTCCTACTTCTGTATTAGTATTCTCAGCTACT 96219 || || ||||||||||| ||||| ||||||||| | ||| ||| ||||| | ||||| Sbjct 1283329 GCCAAAACTGTAGCTGTAGTTGTACCATCTCCTGCCTCTTCATTCGTATTATTTGCTACA 1283270 Query 96220 TGTT-TAATCATTTGAGCACCTAAGTTTTCAAATGGATCTTCTAAATGAATTTCTCTAGC 96278 | || || | |||| || || | || | |||| ||||| ||| | || | || | || Sbjct 1283269 TCTTGTACTAATTTT-GCTCCAATATTCTGAAATTTATCTTTTAATTCAACTCCTTTGGC 1283211 Query 96279 CACACTTACACCATCTTTAGTAATGATTGGATTATACTGGTCTAAACCTAGTATAACATT 96338 || | ||||||||||||||||| | ||| || | | ||| |||||||| Sbjct 1283210 AACTGTAACACCATCTTTAGTAATTTTCGGACTACCCCAACTTTGTTCTAAGATAACATT 1283151 Query 96339 CTTACCTGATGGTCCTAGAGTTACTTTAACTGCATTAGCTAAAGCATCTACACCT 96393 ||| ||| || | |||||| |||||||| |||||| ||| |||||| Sbjct 1283150 ACGTCCTTTTGGACCCATTGTTACTGCAACTGCATCTGCTAAAATATCAACACCT 1283096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 321181693150174