Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq1883 125 9e-24 seq317 96.9 4e-15 >seq1883 Length=454209 Score = 125 bits (138), Expect = 9e-24 Identities = 128/167 (77%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 172399 AAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTG 172458 ||||| | |||||| | ||||| || || || || | ||| |||||| || | | || Sbjct 61093 AAGAATTATTATGGTTCATTAATGGATCCACAAATGCTAAAAAATTAAGCGAAAAGGATG 61152 Query 172459 TTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAA 172518 || | ||||| ||| ||| |||| ||||| || ||||||| || || ||||| || | Sbjct 61153 TTCATATTTGGGATGCGAATAGTTCACGTGAGTTCTTAGATTCTTGTGGTTTTACAGATA 61212 Query 172519 GAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACAT 172565 | ||||||| |||||||| || |||||||||||||||||||||||| Sbjct 61213 GGGAAGAAGGAGATTTAGGTCCTATTTATGGATTTCAATGGAGACAT 61259 >seq317 Length=4095164 Score = 96.9 bits (106), Expect = 4e-15 Identities = 143/200 (72%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 165953 AAGGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAGCATGGTGAACAA 166012 || ||||| ||||| ||| | ||| || ||||| ||| ||| | ||||| ||| Sbjct 4026342 AAAGTTGCACAATTGGCTGGTTCTGTAGCTGAACATTCAGCATATCATCATGGAGAAGTT 4026401 Query 166013 AAT-TTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATAGC 166071 | |||||| || |||| ||||| |||| ||| |||| || || | ||||| ||| Sbjct 4026402 TCTCTTATGTCAA-CTATTATTAATCTTGCACAAAATTTCGTAGGAAGTAATAACATAAA 4026460 Query 166072 ATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCTGC 166131 |||||| |||| ||||||||||||||| ||| | | |||||| |||||| | || Sbjct 4026461 TTTACTTCAACCAATTGGTCAATTTGGTACAAGACTTGCAGGAGGAAAAGATGCAGCGAG 4026520 Query 166132 ATCAAGATATATTTATACCA 166151 | ||||||||| ||||| Sbjct 4026521 TCCTCGATATATTTTTACCA 4026540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632426777970480