Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq878 102 5e-17 >seq878 Length=1131996 Score = 102 bits (112), Expect = 5e-17 Identities = 164/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTG-AATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807 |||| || ||||| | ||| || | || |||| || ||| || ||||| ||||| || Sbjct 558647 TTCCACCTCTCAAACGCAGTACTAAATGTAATGTTGA-CTCTTTTTGAATATTATAATCA 558589 Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867 || | |||| |||| || ||||| ||||| || ||||||| || |||||| ||| | Sbjct 558588 GACAATGTGCGTCCATCTTCTAGTTGTTTTCCAGCAAAGATCAATCTTTGCTGATCTGGT 558529 Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCG 34927 || | || ||||| || | |||||| ||| || | | || | || |||||| Sbjct 558528 GGAATTCCTTCCTTATCTTGAATTTTTGCTTTTACATTTTCAATGGTATCTGAGGCCTCA 558469 Query 34928 ACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 || || | ||||| || || || || | || || ||||||||||||||||| Sbjct 558468 ACCTCCAGAGTTATTGTTTTACCTGTCAATGTTTTGACAAAGATCTGCATGAT 558416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325661259298574