Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_022757.1 Length=38880 Score E Sequences producing significant alignments: (Bits) Value seq6632 105 2e-18 >seq6632 Length=1117 Score = 105 bits (116), Expect = 2e-18 Identities = 158/223 (71%), Gaps = 1/223 (0%) Strand=Plus/Minus Query 31627 ATGAGATCACTAGAACTATTTGCAGGAATTGGTGGCATCGCATTGGCTGAACAAATGGCT 31686 |||| | || |||| |||||||| ||||||||||| || || | || ||||||||||| Sbjct 554 ATGAAAGCATTAGAGCTATTTGCTGGAATTGGTGGAATTGCTCTTGCAGAACAAATGGCA 495 Query 31687 GGAATTGAAGTAGCTGGTTTGTGTGAGTATGCAGACTATCCGCGCATGATTTTAAAAAAG 31746 || ||||| || | |||||| | || | ||||||||| || ||||||||||||| Sbjct 494 GGGATTGAGGTTGTTGGTTTATCCGAAATCGAAGACTATCCTGTCAGGATTTTAAAAAAG 435 Query 31747 CACTGGCCAGATGTGCCCTTATTCAAGGATGTGAAGAAGCTTGATCGAGAAGAACTCACA 31806 ||| |||||| | || | | || ||||| |||| | | | | || | | Sbjct 434 AACTTTCCAGATATACCAATTCTGAAAGATGT-TAGAAAAATTAACAAAAAACGTTAAAG 376 Query 31807 AATGCAGGAATCAGCCCTGACTCAATTGACATTGTTTCCGGAG 31849 | | ||| || ||| ||| ||||||||||| ||||||||| Sbjct 375 GAGGTAGGCATTGACCCAGACACAATTGACATTATTTCCGGAG 333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124282671735784