Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_022762.1 Length=33996 Score E Sequences producing significant alignments: (Bits) Value seq4744 159 8e-35 >seq4744 Length=1121 Score = 159 bits (176), Expect = 8e-35 Identities = 360/535 (67%), Gaps = 7/535 (1%) Strand=Plus/Plus Query 27512 ATCAACGAGTCTGGGCTTTACTCCTTGATCCTTTCAAGCAAGTTGCCAAGTGCTAAGAAG 27571 || ||||||||||| || || ||| || | ||||| |||| ||||||| | Sbjct 264 ATTAACGAGTCTGGTCTCTATAGCTTAATTATGAGTAGCAAAATGCCTGAGGCTAAGAGG 323 Query 27572 TTCAAGCGTTGGGTTACGAGCGAAGTTATTCCAACTATCCGGAAGCACGGCGCTTATATG 27631 || || | ||||||||| || || || | ||| |||| | |||| || || || | Sbjct 324 TTTAAACATTGGGTTACAAGTGAGGTATTACCAGCTATTAGACAGCATGGAGCGTACCTT 383 Query 27632 ACAGATCAAAAGGCCTTTGACATTGTTCATAACAAGAGCGGGTTGATTGACCTTCTACAG 27691 || || || || ||||| || ||| || ||||||| ||| | || ||| || || Sbjct 384 ACTGACCAGAAAGCCTTGGATATTATTACTAACAAGGACGGCCTAGCTGGCCTGCTTAAG 443 Query 27692 CAAGCCGCAGATCAGCTGAGAGAAAAGAATATTCAGATTGAGGAAATGAGACCAAAAGCA 27751 ||||| || || ||||| | |||| |||| || ||| || || ||| ||||| Sbjct 444 CAAGCTGCTGACCAGCTTGAACAAAAAGATATCCAAATTAAGCGGTTGGAACCTAAAGCT 503 Query 27752 TTGTTTGCTGATTCAGTTTCTTCTAGTAGCTCA-ACTATCTCAGTTGGAGACCTTGCCAA 27810 | ||||| ||| ||||||| | ||| | | | ||||||| |||||| || |||||||| Sbjct 504 CTATTTGCAGATACAGTTTCAGCAAGT-GATGACACTATCTTAGTTGGTGAACTTGCCAA 562 Query 27811 GATCATCAA--GCAAAACGGCATTAACATTGGCTCTATTAGATTGTTCGCTTGGTTACGT 27868 ||| | || ||||| || | || |||||| | ||| | || ||| | ||| Sbjct 563 GATTTTGAAAGGCAAA--GGTGTAAATATTGGCCAAAATAGGCTTTTTAAGTGGATGCGT 620 Query 27869 GATAACGGCTATTTAATCAAGCGGCAAGGCAGTGACTACAATTCACCAACTCAGTACTCA 27928 ||||| |||||||| || || ||| ||||||||| |||| || ||||| | || Sbjct 621 GATAATGGCTATTTGATAAACCGGAGGGGCAGTGACCGCAATGTTCCGACTCAAAAGTCT 680 Query 27929 ATGGAGCGTGGCTGGTTTGAGGTAAAAGAAACAACGGTCAACTATCCAGACGGCCGCACC 27988 ||||| ||| || || | ||||||||| |||| |||| || || | Sbjct 681 ATGGA-AATGGGACTATTCAGATTAAAGAAACAGTAATCAATCATCCTGATGGTAAGCCA 739 Query 27989 ATTGTTAAGAAGACTCCTAAAGTTACTGGAAAAGGTCAACAATACTTCGTAAACA 28043 | | ||| ||||| || ||||| ||||| ||||| || | || || || |||| Sbjct 740 AGTATTAGAAAGACGCCAAAAGTAACTGGTAAAGGCCAGCGCTATTTTGTGAACA 794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108655346449816