Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq3153 172 9e-38 seq7885 168 1e-36 seq878 150 3e-31 seq1955 143 4e-29 seq2112 140 5e-28 seq74 95.1 2e-14 >seq3153 Length=1268 Score = 172 bits (190), Expect = 9e-38 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | ||||| |||| |||||||| || ||| |||| || ||| | | Sbjct 970 TGCAGATTTTTGTTAAAACCCTAACTGGAAAAACCATCACTCTTGAAGTTGAAGCTTCAG 1029 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||||||| | |||||||| |||||| ||| ||||||||| |||||||| ||||||| Sbjct 1030 ATACTATAGAGAATGTAAAGGCTAAAATCCAAGATAAAGAAGGAATTCCACCAGATCAAC 1089 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || || | || ||||| ||||||||| | || ||| ||||| | ||||||| |||| Sbjct 1090 AACGATTGATCTTTGCTGGTAAACAACTTGAAGATGGAAGAACACTCTCAGATTACAATA 1149 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||||||||| || |||||||||||||| || | ||||||||| Sbjct 1150 TCCAAAAAGAATCTACACTCCATTTAGTATTAAGACTTCGAGGAGGTA 1197 >seq7885 Length=810 Score = 168 bits (186), Expect = 1e-36 Identities = 173/226 (77%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| ||||||| | || ||||||||||||||| | || || ||| | | Sbjct 291 TGCAAATATTTGTAAAAACTCTTACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCTG 232 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| ||||||| |||| |||||| ||| ||| ||||| |||||||| ||||| | Sbjct 231 ATACAATTGAAAATGTTAAAACTAAAATTCAAGATAAGGAAGGTATTCCACCAGATCAGC 172 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||| | |||||||| |||||||| | || ||| | | || | | |||||||||| Sbjct 171 AGAGATTGATTTTTGCTGGTAAACAGCTCGAAGATGGTCGTACACTTTCGGATTATAATA 112 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||||||||| || | ||||||||| | || || ||||| || Sbjct 111 TTCAAAAAGAATCAACACTACATTTAGTACTGCGTTTGAGAGGTGG 66 Score = 147 bits (162), Expect = 3e-30 Identities = 176/238 (74%), Gaps = 1/238 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | ||||| | || |||||| || | ||| | || || ||| | || Sbjct 518 TGCAAATTTTCGTTAAAACTCTTACGGGAAAACCA-TCACTCTGGAGGTTGAAGCTTCCG 460 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| ||||||| || | |||||| ||| ||| ||||| ||||| || ||||||| Sbjct 459 ATACTATTGAAAATGTTAAGACTAAAATTCAAGATAAGGAAGGTATTCCTCCTGATCAAC 400 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||||| || |||||||| ||||||||||| ||| | | || | | |||||||| | Sbjct 399 AGAGACTGATCTTTGCAGGAAAACAATTAGAAGATGGTCGTACACTTTCGGATTATAACA 340 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 | || |||||||| ||| | ||| | ||| | || | | || |||| ||||||| Sbjct 339 TCCAGAAAGAATCAACTCTTCATCTTGTACTTCGTCTTCGTGGTGGTATGCAAATATT 282 Score = 145 bits (160), Expect = 1e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | ||||| | || || ||||| |||||| | || || ||| | || Sbjct 746 TGCAAATTTTTGTTAAAACTCTTACGGGTAAAACTATTACTCTGGAAGTTGAAGCTTCCG 687 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| ||||||||||| ||||| ||| |||||||| ||||| ||||| |||| Sbjct 686 ATACCATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGTATTCCTCCCGACCAAC 627 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||| | || ||||| || ||||||||||| ||| | | || | | |||||||||| Sbjct 626 AGAGATTGATCTTTGCTGGAAAACAATTAGAAGATGGTCGTACTCTTTCCGATTATAATA 567 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||||||||| || ||||| | || ||||| | | || |||| Sbjct 566 TTCAAAAAGAATCAACCCTCCATCTCGTTCTACGACTTCGTGGTGGTA 519 >seq878 Length=1131996 Score = 150 bits (166), Expect = 3e-31 Identities = 171/227 (75%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 |||| || || | |||||||| ||||| |||||||| ||| | || || || | | | Sbjct 558420 TGCAGATCTTTGTCAAAACATTGACAGGTAAAACAATAACTCTGGAGGTTGAGGCCTCA- 558478 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||| ||| ||||||||||| ||||| ||| ||| ||||| |||||||| ||||| Sbjct 558479 GATACCATTGAAAATGTAAAAGCAAAAATTCAAGATAAGGAAGGAATTCCACCAGATCAG 558538 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 |||||| | || ||||| || |||||| |||| ||| | || || | ||||||||| Sbjct 558539 CAAAGATTGATCTTTGCTGGAAAACAACTAGAAGATGGACGCACATTGTCTGATTATAAT 558598 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 || |||||||| || || | ||||||||| | || || ||||| || Sbjct 558599 ATTCAAAAAGAGTCAACATTACATTTAGTACTGCGTTTGAGAGGTGG 558645 Score = 122 bits (134), Expect = 1e-22 Identities = 120/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | ||||| | || |||||||| |||||| | || || ||| | | Sbjct 558648 TGCAAATTTTTGTCAAAACGCTCACTGGAAAAACGATTACTTTAGAAGTTGAAGCTTCAG 558707 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| ||||||| ||| |||||| || ||||||||| ||||| |||||||||| Sbjct 558708 ATACTATTGAAAATGTTAAAGCTAAAATTCAGGATAAAGAAGGTATTCCTCCCGATCAAC 558767 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGAT 146186 | ||| | |||||||| || |||||||| || ||| Sbjct 558768 AGAGATTGATTTTTGCTGGAAAACAATTGGAAGAT 558802 >seq1955 Length=5322578 Score = 143 bits (158), Expect = 4e-29 Identities = 168/226 (74%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | ||||| | || || ||||| |||||| | || || ||| | | Sbjct 1861480 TGCAAATCTTTGTCAAAACTCTCACTGGCAAAACCATTACTTTAGAAGTTGAAGCTTCGG 1861421 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || ||||||||||| ||| || ||| ||||||||| ||||| || ||||| | Sbjct 1861420 ACACAATAGAAAATGTAAAAGCTAAGATTCAAGATAAAGAAGGAATTCCTCCAGATCAGC 1861361 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || || | || ||||| |||||||| |||| ||| ||||| | |||||||||||| Sbjct 1861360 AACGATTGATCTTTGCTGGTAAACAGCTAGAAGATGGAAGAAC--TCTCAGATTATAATA 1861303 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||||||||| || |||||||||| || || | ||||||| Sbjct 1861302 TCCAAAAAGAATCTACACTCCATTTAGTGTTGAGACTTCGAGGAGG 1861257 Score = 141 bits (156), Expect = 1e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | ||||| | || |||||||| || || |||| || ||| | | Sbjct 1861708 TGCAAATCTTTGTCAAAACTCTTACTGGAAAAACTATCACACTTGAAGTTGAAGCTTCAG 1861649 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || |||||||||| ||| || ||| |||||||| ||||| || || || | Sbjct 1861648 ACACAATAGAAAATGTAAAGGCTAAGATTCAAGACAAAGAAGGAATTCCCCCTGACCAGC 1861589 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || ||||| |||||||||||||| ||| ||||| | |||||||||||| Sbjct 1861588 AACGTTTGATCTTTGCTGGTAAACAATTAGAAGATGGAAGAACTCTCTCAGATTATAATA 1861529 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||| ||||| || ||||||||||||| || | ||||||||| Sbjct 1861528 TCCAAAAGGAATCTACACTCCATTTAGTATTGAGACTTCGAGGAGGTA 1861481 Score = 132 bits (146), Expect = 8e-26 Identities = 165/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | ||||| | || |||||||| || ||| |||| || ||| | | Sbjct 1861254 TGCAAATCTTTGTCAAAACTCTCACTGGAAAAACTATCACTCTTGAAGTTGAAGCTTCAG 1861195 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || ||||||||||| ||| || ||| ||||||||| |||||||| ||||| | Sbjct 1861194 ACACAATAGAAAATGTAAAAGCTAAGATTCAAGATAAAGAAGGAATTCCACCTGATCAGC 1861135 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | |||||||| || ||||| | || ||| ||||| | ||||||| |||| Sbjct 1861134 AACGTTTGATTTTTGCTGGCAAACAGCTTGAAGATGGAAGAACTCTTTCAGATTACAATA 1861075 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | |||||||| || ||| | ||| | ||||| ||| | | ||||| Sbjct 1861074 TTCAAAAAGAGTCTACTCTTCATCTGGTATTGCGACTTCGGGGAGG 1861029 Score = 132 bits (146), Expect = 8e-26 Identities = 156/211 (74%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | || || |||||||||||||| || || | || || ||| | | Sbjct 1861936 TGCAGATCTTTGTTAAGACTTTAACAGGAAAAACCATCACCTTAGAAGTTGAAGCTTCAG 1861877 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || | |||||||| ||| || ||| ||||||||| |||||||| ||||||| Sbjct 1861876 ACACAATAGAGAATGTAAAGGCTAAGATTCAAGATAAAGAAGGAATTCCACCAGATCAAC 1861817 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | |||||||| || |||||| | || ||| |||||| | |||||||||||| Sbjct 1861816 AACGTTTGATTTTTGCTGGCAAACAACTTGAAGATGGTAGAACACTCTCAGATTATAATA 1861757 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATT 146242 | || ||||| || ||| | ||| ||||||| Sbjct 1861756 TTCAGAAAGAGTCTACTCTTCATCTAGTATT 1861726 Score = 132 bits (146), Expect = 8e-26 Identities = 156/211 (74%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | || || |||||||||||||| || || | || || ||| | | Sbjct 1864576 TGCAGATCTTTGTTAAGACTTTAACAGGAAAAACCATCACCTTAGAAGTTGAAGCTTCAG 1864517 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || | |||||||| ||| || ||| ||||||||| |||||||| ||||||| Sbjct 1864516 ACACAATAGAGAATGTAAAGGCTAAGATTCAAGATAAAGAAGGAATTCCACCAGATCAAC 1864457 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | |||||||| || |||||| | || ||| |||||| | |||||||||||| Sbjct 1864456 AACGTTTGATTTTTGCTGGCAAACAACTTGAAGATGGTAGAACACTCTCAGATTATAATA 1864397 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATT 146242 | || ||||| || ||| | ||| ||||||| Sbjct 1864396 TTCAGAAAGAGTCTACTCTTCATCTAGTATT 1864366 Score = 123 bits (136), Expect = 4e-23 Identities = 154/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | ||||| | || ||||| || ||||| |||| || ||| | | Sbjct 1860799 TGCAGATCTTTGTTAAAACTCTTACTGGAAAGACTATTACACTTGAAGTTGAAGCTTCGG 1860740 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | ||||||||| ||| || ||| ||||||||| ||||| || ||||| | Sbjct 1860739 ATACAATAGAGAATGTAAAAGCTAAGATTCAAGATAAAGAAGGAATTCCTCCTGATCAGC 1860680 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || || | |||||||| || |||||| | || ||| ||||| | |||||| |||| Sbjct 1860679 AACGATTGATTTTTGCTGGCAAACAACTTGAAGATGGAAGAACACTTTTAGATTACAATA 1860620 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATT 146242 | ||||||||||| || | ||||| ||||| Sbjct 1860619 TCCAAAAAGAATCTACACTGCATTTGGTATT 1860589 Score = 111 bits (122), Expect = 2e-19 Identities = 161/226 (71%), Gaps = 1/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | ||||| | || ||||| || ||||| |||| || ||| | | Sbjct 1861026 TGCAGATCTTTGTTAAAACTCTTACTGGAAAGACTATTACACTTGAAGTTGAAGCTTCGG 1860967 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | |||||||| ||| || ||| ||| ||||| ||||| || || |||| Sbjct 1860966 ATACAATAGAGAATGTAAAGGCTAAGATTCAAGATAA-GAAGGAATTCCGCCTGACCAAC 1860908 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | |||||||| || ||||| | || ||| ||||| | |||||||||||| Sbjct 1860907 AACGTTTGATTTTTGCTGGCAAACAGCTTGAAGATGGAAGAACTCTCTCAGATTATAATA 1860848 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | || ||||| || ||| | ||| | ||||| ||| | ||||||| Sbjct 1860847 TTCAGAAAGAGTCTACTCTTCATCTGGTATTGCGACTTCGAGGAGG 1860802 >seq2112 Length=2858 Score = 140 bits (154), Expect = 5e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | || || | || || ||||| |||||| |||| || ||| | || Sbjct 166 TGCAAATTTTCGTCAAGACTCTCACGGGTAAAACTATTACTCTTGAAGTTGAAGCTTCCG 225 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| ||||||||||| ||||| ||| || ||||| |||||||| || |||| Sbjct 226 ATACAATTGAAAATGTAAAAGCAAAAATTCAAGACAAGGAAGGTATTCCACCTGACCAAC 285 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||| | || ||||| || ||||||||||| ||| | || | | |||||||||| Sbjct 286 AGAGATTGATCTTTGCTGGAAAACAATTAGAAGATGGACGTACACTTTCCGATTATAATA 345 Query 146212 TACAAAAAGAATCGACT 146228 | ||||||||||||||| Sbjct 346 TTCAAAAAGAATCGACT 362 Score = 109 bits (120), Expect = 9e-19 Identities = 114/150 (76%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 146097 ATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGA 146156 ||| ||||||||||| ||||| ||| |||||||| ||||| || |||||||||||| Sbjct 3 ATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGTATTCCTCCTGATCAACAAAGA 62 Query 146157 CTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAA 146216 | |||||||| || |||||||| || ||| | || | | ||||||||||| ||| Sbjct 63 TTGATTTTTGCTGGAAAACAATTGGAAGATGGCCGTACTCTTTCCGATTATAATATTCAA 122 Query 146217 AAAGAATCGACTATCCATTTAGTATTACGA 146246 |||||||| || | ||| | || || ||| Sbjct 123 AAAGAATCTACACTTCATCTTGTTTTGCGA 152 >seq74 Length=1704272 Score = 95.1 bits (104), Expect = 2e-14 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 146132 AGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAG 146191 ||| |||||||| | |||||||||| | || ||||| || |||||||| || ||| ||| Sbjct 1126086 AGGAATTCCACCTGGTCAACAAAGATTAATCTTTGCTGGAAAACAATTGGAAGATGGTAG 1126145 Query 146192 AACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAG 146251 || | ||||||||||||| || || ||||| || | ||||| || |||| ||||| Sbjct 1126146 GACACTCTCAGATTATAATATTCAGAAGGAATCTACATTACATTTGGTGCTACGTTTAAG 1126205 Query 146252 AGGAGGT 146258 || ||| Sbjct 1126206 GGGTGGT 1126212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786088314022320