Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq290 455 2e-122 seq2024 412 3e-109 seq2806 161 7e-34 seq1955 156 3e-32 seq2691 111 1e-18 seq83 109 4e-18 seq5254 96.9 3e-14 seq2040 95.1 9e-14 seq317 91.5 1e-12 seq1395 86.0 5e-11 >seq290 Length=7800385 Score = 455 bits (504), Expect = 2e-122 Identities = 902/1323 (68%), Gaps = 14/1323 (1%) Strand=Plus/Plus Query 281381 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 281440 ||||||||||| || || || ||| || |||||||| | |||| || ||||| Sbjct 5047475 TTAGTAATAGTGATTTTGTTCTCTTTACCAGTAGATTTATCGACTGCAGAGACGTTAAGG 5047534 Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500 |||||||||||||| | ||||| ||||||||||||||||| || |||| |||| || Sbjct 5047535 ATACCATTGGCATCGATGTCAAAGGTGACTTCAATTTGAGGAACTCCTCGAGGAGCTGGA 5047594 Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560 || || || | | |||| | || | ||| |||||||| || | ||||| Sbjct 5047595 GGAATGCCACTGAGCTCAAATTTGCCTAATAGATTGTTATCTTTTGTCATAGCACGTTCT 5047654 Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620 || || | | ||| || ||| | | ||||||||| | ||| || || || | Sbjct 5047655 CCTTCATAGACTTGAATCAATACTCCTGGTTGATTATCAGCATACGTAGTGAAGGTTTGA 5047714 Query 281621 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCT 281680 | || || ||||| || || ||||| | ||||| | ||||||| ||||||||| Sbjct 5047715 GTTTGCTTTGTTGGAATGGTAGTATTTCTCTTAATAAGAGCAGTCATAACACCACCAGCA 5047774 Query 281681 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCA 281740 ||||| | ||||||||| | ||| || ||||||| || | | || ||| | || |||| Sbjct 5047775 GTTTCAATACCAAGAGATAAAGGTGTTACATCAAGAAGCAATAGATCTTGTACTTCTTCA 5047834 Query 281741 TCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCA 281800 | | ||| |||||| || ||||| | |||||| |||||||| ||||| |||||| Sbjct 5047835 GATTTGTCTCCATGAAGAATGGCAGCTTGCACAGCAGCTCCATATGCCACAGCCTCATCA 5047894 Query 281801 GGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACC 281860 ||||| | || | ||| | || || ||||||||||| | ||||||| | | | Sbjct 5047895 GGATTGATAGACTTATTCAATTCCTTTCCATTGAAAAAGTCCTGCAGAAGTTTTTGAATC 5047954 Query 281861 TTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGT 281920 |||||||| || | ||||| ||||| | || || || || | ||| | |||||||| | Sbjct 5047955 TTAGGAATTCGCGTGGATCCACCAACCAGAACGATATCGTGAATCTGAGCTTTATCCATT 5048014 Query 281921 TTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAA 281980 || | ||| ||| |||||| || || || || |||| || | || | ||| Sbjct 5048015 TTAGCATCGCGTAATGATTTTTCTACTGGCTCGAGTGTTCCTCTGAAAAGATCAGCACAG 5048074 Query 281981 AGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAA 282040 |||||||| ||| |||||| || | | || | |||| ||||| || | | |||| Sbjct 5048075 AGTTCTTCAAATCGAGCTCTGGTGATCGATGTATAAAAATCGATTCCCTCATAGAGAGAA 5048134 Query 282041 TCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCT 282100 |||| |||||| ||| |||||| || ||||| || | ||||| ||||| ||||| ||| Sbjct 5048135 TCAATTTCAATGCTAGCTTGAGTAGACGAAGACAGAGTGCGTTTTGCACGCTCACAAGCT 5048194 Query 282101 GTCCTTAGTCTTCGTA-AG-GCTTTTGCTGATTGATTCAAATCTGTTTTATATTTTCTCT 282158 || || | | || | || || ||| | | | | |||||| |||||||||| | | Sbjct 5048195 GTTCTCAAACGACGAAGAGCGCGTTTATT--TGCAGTTAAATCTTTTTTATATTTGCGTT 5048252 Query 282159 TGAAATCTTCAACACACCATG--TTACAAGACGATTATCAAAATCTTCACCTCCCAATTT 282216 |||| |||| ||| | ||| | || | ||| |||||||||||||| || || | | Sbjct 5048253 TGAATTCTTGTACAAA--ATGATTGACCATACGGTTATCAAAATCTTCGCCGCCAAGATG 5048310 Query 282217 AGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAAC 282276 |||| ||||| || | | || | ||||| |||||||||| | |||| | || Sbjct 5048311 GGTATCTCCTGCTGTTGACTTGACCTCGAAAATGCCATCTTCAATGGTTAAAATTGAGAC 5048370 Query 282277 ATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTT 282336 |||| ||| |||||||| | |||||| ||||| || || ||| || ||||| Sbjct 5048371 ATCAAAGGTGCCACCACCAAGATCAAAGATAAGGACGTTGCGTTCGCTGGTAGTTTTTTT 5048430 Query 282337 ATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAG 282396 ||| | ||||| |||| || ||||| || || || || ||||| | ||||| || | Sbjct 5048431 ATCTAAGCCATAAGCAATGGCGGCAGCGGTGGGCTCGTTGATAATACGTAAAACGTTTAA 5048490 Query 282397 ACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGG 282456 || | || | || || || ||||| || || | || || ||||| || || ||||| Sbjct 5048491 GCCCGAGATGGTACCAGCGTCCTTAGTTGCCTGACGCTGCGAGTCGTTGAAGTAAGCAGG 5048550 Query 282457 AACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCAT 282516 ||||| || ||||||| | || |||||| | ||| || ||||||| ||||| Sbjct 5048551 TACAGTGATCACGGCATTACTGACAGTTTTTCCCAGATATGCTTCAGCTGTTTCCTTCAT 5048610 Query 282517 -TTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTG-CTTGGATTCATTTTGA 282574 ||||| | | |||||| | || ||| || ||| | | ||| | || || Sbjct 5048611 CTTTAC-CAGGACCATTGAACTCACTTCTTC-GGGGAAGAAAGTCTTCGCCTCTCCTTTG 5048668 Query 282575 TATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATTTC 282634 || |||||| || | || ||| |||| |||| | ||| |||| ||||||| ||| Sbjct 5048669 TAATATACTTGAATCTTAGGCTTACCACCATCATTTACAACGGTAAAGGGCCAATGCTTC 5048728 Query 282635 ATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATC--AA 282692 ||||| | |||||| | | || | |||| | |||||| | ||||| ||||| || Sbjct 5048729 ATATCAGCCTGAACAGTGGGATCTTCAAAACGACGACCAATAAGACGTTTGGCATCTGAA 5048788 Query 282693 AAA 282695 ||| Sbjct 5048789 AAA 5048791 Score = 134 bits (148), Expect = 1e-25 Identities = 143/189 (76%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 637115 AGAAAATTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATT 637174 ||||| | ||| | |||| || ||| |||||||| |||||||||||| ||||||||| Sbjct 4522649 AGAAAGTGATTATAGATTTCTCAAGTCCTAATATTGCCAAAGAAATGCATGTTGGACATT 4522590 Query 637175 TAAGATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATG 637234 ||||||| ||||| ||||| || |||| || | |||||| | | ||||| |||| Sbjct 4522589 TAAGATCTACTATAATTGGAGATAGTATTGCAAGATTGTTAGAATTTTTGGGACATGATG 4522530 Query 637235 TTTATCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTATA 637294 | | | || |||||| | ||||||||||| || ||||| || |||||||| ||| || Sbjct 4522529 TATTAAGAATAAATCATATTGGTGATTGGGGTACACAATTTGGAATGTTAATAGCTCATC 4522470 Query 637295 TTAAAAATA 637303 || || ||| Sbjct 4522469 TTCAAGATA 4522461 Score = 125 bits (138), Expect = 5e-23 Identities = 138/184 (75%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 282692 AAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGT 282751 ||||| || ||| | || || | ||| |||| | ||||| ||||| ||||| | || Sbjct 5050468 AAAATGGTGTTGTTGGGGTTCATGGCAACTTGGTTCTTGGCAGCATCGCCAATTAATCGT 5050527 Query 282752 TCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATA 282811 || || || ||||||| |||||| || ||||| ||||| ||||||||||| ||||| Sbjct 5050528 TCAGTTTCCGTAAATGCAACATAGCTAGGTGTTGTACGATTTCCTTGATCATTAGCAATG 5050587 Query 282812 ATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATA 282871 ||||| ||||| |||| || ||||||| ||||| | |||| || || | ||||||| Sbjct 5050588 ATTTCTACTTTTCCATGCTGGAATACACCAACACAGGAATAAGTAGTGCCAAGATCAATA 5050647 Query 282872 CCAA 282875 |||| Sbjct 5050648 CCAA 5050651 >seq2024 Length=8919894 Score = 412 bits (456), Expect = 3e-109 Identities = 819/1205 (68%), Gaps = 12/1205 (1%) Strand=Plus/Minus Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500 |||||||| ||||| | |||||||||||| ||||||||||| || ||||| | |||||| Sbjct 5101112 ATACCATTAGCATCGATATCAAATGTGACCTCAATTTGAGGAACACCTCTAGGTGCAGGT 5101053 Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560 || || || | | || |||| ||| | ||||||||||| || | || || Sbjct 5101052 GGAATGCCAGTAAGTTCGAACTTTCCAAGAATGTTATTATCTTTTGTCATAGCTCTCTCT 5100993 Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620 || ||| | | ||| || || ||| ||||||||| ||||| || ||||| | Sbjct 5100992 CCTTCGTATACTTGAATCAAGACGCCAGGTTGATTATCGGAATAGGTAGTAAAGGTTTGT 5100933 Query 281621 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCT 281680 | || || || || || ||||| || | || | | | ||||| | |||||||||| Sbjct 5100932 GTTTGCTTGGTTGGTATCGTCGTGTTCCTCTTGATCAAAGTTGTCATCACACCACCAGCT 5100873 Query 281681 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCA 281740 ||||||| ||| ||||| | ||||||||||| | ||| | | || |||| || || | Sbjct 5100872 GTTTCTATACCCAGAGACAATGGAGTGACATCCAATAGCAACAGATCCTGAACTTCTTGA 5100813 Query 281741 TCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCA 281800 | | |||| | |||||| || || | ||| || ||||| ||||||||||||||| Sbjct 5100812 GATTTGTCACCATGCAAAATAGCGGCCTGTACAGCTGCGCCATAAGCAACAGCTTCATCA 5100753 Query 281801 GGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACC 281860 || || | | || ||| | || ||| ||||||||||| | || | || | | | Sbjct 5100752 GGGTTGATCGATTTATTCAATTCTTTTCCATTGAAAAAGTCCTGTAGTAATTTTTGAATC 5100693 Query 281861 TTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGT 281920 || || || | | || || || ||||| ||||| ||| || || | || |||| Sbjct 5100692 TTTGGTATTCTGGTAGAACCACCGACTAAAACAATACTATGAACATGAGCCTTGTCCATC 5100633 Query 281921 TTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAA 281980 || | ||| ||| ||||||| || ||||| | | ||| || | || | ||| Sbjct 5100632 TTGGCATCTCTCAAAGCTTTTTCGACCGGTTCCAATGTACTTCTGAATAGATCCGCGCAA 5100573 Query 281981 AGTTCTTCGAATTTAGCTCTAGTAA--GA-GTGACATTATAATCAATTCCTTCGAACAAA 282037 |||||||| ||| | ||||| |||| || ||| | ||||||| || ||||| | | Sbjct 5100572 AGTTCTTCAAATCTGGCTCTGGTAACCGATGTG---TAGAAATCAATGCCCTCGAAAAGA 5100516 Query 282038 GAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACAT 282097 ||||| | ||| || | | ||| || ||||| || | | || || | ||||| Sbjct 5100515 GAATCGATTTCGATGCTGGCTTGTGTTGAAGAGCTTAAAGTTCTCTTTGCTCTCTCACAA 5100456 Query 282098 GCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCAAATCTGTTTTATATTTTC 282155 || || || | || || | ||| | || ||| | | || ||| | || ||||||| Sbjct 5100455 GCGGTTCTCAATCGTCTAAGGGCCCT--CTTATTCGAACTTAAGTCTTTCTTGTATTTTC 5100398 Query 282156 TCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATT 282215 ||||||| || | || | | || | |||||||| || |||||||| || | | Sbjct 5100397 TCTTGAATTCCTGGACGAAGTGATTCACCATCCGATTATCGAAGTCTTCACCACCAAGAT 5100338 Query 282216 TAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAA 282275 ||||| || | || | | |||| || | |||||||| | | ||| | | | Sbjct 5100337 GAGTATCGCCCGCTGTTGACTTCACTTCAAAGATGCCATCTTCGATGGTCAATATGGACA 5100278 Query 282276 CATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTT 282335 ||||| ||| ||||| |||| ||||| || | ||||||| |||| | |||| Sbjct 5100277 CATCAAAGGTACCACCTCCCAAGTCAAAGATCAATACATTCTTTTCACCTGCAGTTTTTT 5100218 Query 282336 TATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAA 282395 |||| | ||||| |||| || || || |||||||||||||| ||||| |||||||| | Sbjct 5100217 TATCTAAGCCATAAGCAATCGCCGCCGCGGTTGGTTCATTAATTATTCTTAAAACATTTA 5100158 Query 282396 GACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAG 282455 || || ||| ||| |||||||| || ||||||||||||||||| || |||||||| | Sbjct 5100157 AGCCTGCTATTGCTCCCGCATCTTTGGTAGCTTGTCTTTGTGAATCATTGAAATATGCGG 5100098 Query 282456 GAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCA 282515 | ||||||||||| |||| || ||| |||||| | || || ||| |||| |||| Sbjct 5100097 GGACAGTAATAACAGCATTGGTAACTGTTTTTCCTAAGTATGCTTCTGCAGTTTCCTTCA 5100038 Query 282516 TTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTG-CTTGGATTCATTTTGA 282574 | || | | | ||| || || | || ||| || ||| | | ||| | |||| || | Sbjct 5100037 TCTTCGTGAGCACCATCGAAGACACTTCTTCAGG-GAAGAAAGTCTTTGTTTCACCTTTA 5099979 Query 282575 TATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATTTC 282634 || || || | | | |||||| ||| | || || || | |||||||||| |||| Sbjct 5099978 TACGAAACCTTGATCTTTGGTTTTCCTCCATCGTTCATCACCGTGAATGGCCAATGTTTC 5099919 Query 282635 ATATC 282639 ||||| Sbjct 5099918 ATATC 5099914 Score = 123 bits (136), Expect = 2e-22 Identities = 139/186 (75%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 282690 CAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 282749 |||||||||| ||| | || || | ||| | |||| ||| || || || |||||||| Sbjct 5099130 CAAAAATAGTGTTGTTCGGGTTCATTGCGACCTGATTTTTAGCCGCGTCGCCAATCAGTC 5099071 Query 282750 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 282809 |||||| || || || | ||||| || || || ||||| ||||||||||| |||| Sbjct 5099070 TTTCTGTGTCCGTGAAGGCGACATAACTCGGTGTCGTTCGATTTCCTTGATCATTTGCAA 5099011 Query 282810 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 282869 | ||||||||||| |||| || | ||||| || ||| | |||| || |||||||||| Sbjct 5099010 TGATTTCAACTTTTCCATGCTGGAAAACACCCACGCAAGAATAAGTAGTGCCTAAATCAA 5098951 Query 282870 TACCAA 282875 | |||| Sbjct 5098950 TTCCAA 5098945 Score = 98.7 bits (108), Expect = 7e-15 Identities = 176/261 (67%), Gaps = 21/261 (8%) Strand=Plus/Minus Query 86017 CCATTTGAGATATTCATTAACGAAACATCTAATGTCCCAGCTCCTAAGTCATAAACAATT 86076 |||| | ||| ||| || || ||||| || || ||| |||| |||||| | | | | Sbjct 5100302 CCATCTTCGATGGTCAATATGGACACATCAAAGGTACCACCTCCCAAGTCAAAGATCAAT 5100243 Query 86077 ACGTT------ACCACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGA 86130 || || ||| |||||||||||| |||| || || |||| Sbjct 5100242 ACATTCTTTTCACCTGCAGTTTTTTTAT---------------CTAAGCCATAAGCAATC 5100198 Query 86131 GCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAA 86190 || || || |||||||||||||||||| | | ||||| ||| || || ||| | | | Sbjct 5100197 GCCGCCGCGGTTGGTTCATTAATTATTCTTAAAACATTTAAGCCTGCTATTGCTCCCGCA 5100138 Query 86191 TCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTTTA 86250 || || |||||||| |||| ||||| |||||||| || ||||||||||| || || Sbjct 5100137 TCTTTGGTAGCTTGTCTTTGTGAATCATTGAAATATGCGGGGACAGTAATAACAGCATTG 5100078 Query 86251 TTAATAGGTTTTTGTAAATAT 86271 ||| | |||| ||| ||| Sbjct 5100077 GTAACTGTTTTTCCTAAGTAT 5100057 Score = 89.7 bits (98), Expect = 4e-12 Identities = 140/200 (70%), Gaps = 3/200 (2%) Strand=Plus/Plus Query 161567 GAATACATTTCTCCATGAGCATTTTCCATTGCATATTGGAAACCATAAGCACATTCAGCT 161626 |||||||||||| |||| |||||||||| ||| ||| |||||||| ||| || Sbjct 2396632 GAATACATTTCTGAATGAACATTTTCCATGGCAACTTGAAAACCATAGAAACAACGTGCC 2396691 Query 161627 TCTTTTATTTTCACAACATCAATAAGATTTTCTTTAATATTAGCATTAACAATACCATCA 161686 ||| |||||| || | | | ||| ||| || ||| |||| ||||| |||||| Sbjct 2396692 TCTGTTATTTGTACTTCTTGACTAAATCGTTCAACAAGATTCTCATTGACAATTCCATCA 2396751 Query 161687 GCTGCCGCAAAAAATGCCAATACGTGCATAATAAAATTTCTATCATCATCGCTCAAATGA 161746 | ||| ||||||||||| || || || ||||||| | | ||| | | || | Sbjct 2396752 GATGCTGCAAAAAATGCTAAGACATGAGATATAAAATGTTTTTCACTGGCAGTTAA---A 2396808 Query 161747 TTATTCCAATCATTCACATC 161766 |||||||||||| ||||| Sbjct 2396809 TTATTCCAATCAAATACATC 2396828 >seq2806 Length=8540524 Score = 161 bits (178), Expect = 7e-34 Identities = 287/413 (69%), Gaps = 13/413 (3%) Strand=Plus/Plus Query 282426 CTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTT 282485 |||||||||||| ||| |||||||| || || ||||| | || |||| || |||| || Sbjct 2424908 CTTGTCTTTGTGCATCATTAAAATAAGCTGGTACAGTGACCACAGCATGAGTAACTTTTT 2424967 Query 282486 TTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTT 282545 | || | ||| || |||||||| ||||||||||| | | ||| | ||||||| || Sbjct 2424968 TGCCTAAATATGCTTCTGCTGTTTCTTTCATTTTACCAAGTACCATAGCAGAAATTTCTT 2425027 Query 282546 CTGGAGAATATTGCTTGGATTCA--TTTTGATATGATACTTCAAAATATGGTTTATTACC 282603 | || | | || ||| |||| || || || ||| | || |||||| || Sbjct 2425028 CAGGTGCAAATACCTTTTCTTCACCATTAATTACCATTCTT--ATATGCGGTTTACTATT 2425085 Query 282604 AACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAA 282663 | ||| ||||||||||| | |||| ||||| ||| ||| | | || | Sbjct 2425086 CTTTTCAATTACTTTAAATGGAAAGGATTTAATATCACGTTGTACAGTAGGATCTGACCA 2425145 Query 282664 ATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAG---C 282720 |||||||||||||||||||| |||||||||| ||||| ||||| || || Sbjct 2425146 TTCTCTACCAATTAATCGTTTGGCATCAAAAACTGTATTTTCAGGATT---TGTAGTCAA 2425202 Query 282721 TTGATATTTGGCTGCATCTCCAATCAGATGTT--CTGTC-TCTGTAAATGAAACATATGA 282777 ||||| || || ||||||||||| | ||| | || | ||||||| ||||| || Sbjct 2425203 TTGATTCTTTGCAGCATCTCCAATTAATCGTTCACCATCAGCAGTAAATGCCACATAAGA 2425262 Query 282778 TGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTT 282830 ||| || | | ||| ||||||||||| || |||||||| || | ||||||| Sbjct 2425263 TGGTGTAATTCTATTTCCTTGATCATTAGCTATAATTTCTGCTCTTCCATTTT 2425315 Score = 136 bits (150), Expect = 3e-26 Identities = 171/234 (73%), Gaps = 3/234 (1%) Strand=Plus/Plus Query 282193 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 282252 ||| ||||||||||| || || | ||||| || ||| || |||| || | ||| Sbjct 2424596 ATCGAAATCTTCACCACCTAAATGAGTATCACCATTCGTTGCCACAACTTCAAATACTCC 2424655 Query 282253 ATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 282312 || |||| | | | | | |||||| || |||||||| | |||||||| | ||| Sbjct 2424656 ATTATCAATTGTAAGTAAACTGACATCAAAAGTACCACCACCTAAATCAAAAACTAATAC 2424715 Query 282313 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 282372 ||| ||||| |||| ||||||| | |||||| |||| |||||||| || ||||| Sbjct 2424716 ATTTTTTTCTCCATCTT---TTTTATCTAAACCATAAGCAATTGCAGCAGCTGTGGGTTC 2424772 Query 282373 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGC 282426 |||||| ||||||| |||| ||| |||| ||| |||||||||||||||| || Sbjct 2424773 ATTAATGATTCTCATAACAACAAGTCCAGAAATAGTTCCTGCATCTTTAGTAGC 2424826 Score = 104 bits (114), Expect = 2e-16 Identities = 207/304 (68%), Gaps = 7/304 (2%) Strand=Plus/Plus Query 281653 AATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATC 281712 ||||| || ||||| | || ||| | ||||| | ||| | || ||| ||| ||||||| Sbjct 2423989 AATAAGCTTAGTCATTACCCCTCCAACAGTTTCAATACCCATAGTAAGTGGATTGACATC 2424048 Query 281713 AACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAAT 281772 | || |||||| | | | | ||| || ||| ||| | ||||||| | Sbjct 2424049 CAGAAGTACAATA----GCATCTGT--ATCTTGTTCTCCAGAAAGTACTCCTGCTTGTAC 2424102 Query 281773 AGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATT 281832 |||||||||||||||||||||||| ||||| |||| | | | ||| ||||||| Sbjct 2424103 AGCAGCACCATATGCAACAGCTTCGTCAGGGTTAATACCTCGTGATGGTTCTTTACCACC 2424162 Query 281833 GAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATAC 281892 || || | | || | |||| || |||||||| | || || |||||||| | ||| Sbjct 2424163 AAAGAATTCTTTAACTAATTGTTGAACTTTAGGAATTCTAGTAGAACCTCCAACAAGTAC 2424222 Query 281893 AATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAAC-GGGTT 281951 |||||||| || | | ||||| || | ||||| |||||||| | || || || Sbjct 2424223 AATTTCATCTACATCTTTTTTATTCATATCAGAATCTTCCAAAACTTTCTGTACAGGTTT 2424282 Query 281952 CAAG 281955 |||| Sbjct 2424283 CAAG 2424286 Score = 86.0 bits (94), Expect = 5e-11 Identities = 164/242 (68%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 281416 TTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAAT 281475 |||||| | |||| || | |||||| ||||| ||||| | || || || |||||||| Sbjct 2423669 TTTATCCTCAGCAGATACTTGAAGAATTCCATTAGCATCGATTTCGAAAGTAACTTCAAT 2423728 Query 281476 TTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATT 281535 ||| || | |||| | || ||||| || || | || |||| | || ||| || Sbjct 2423729 TTGTGGTATTCCTCGTGGTGCTGGTGGAATGCCAGTAAGATCAAATTTACCAAGAGGATG 2423788 Query 281536 ATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATT 281595 ||| ||||| || | | ||||| || ||| | | ||| ||||| ||| | ||| || Sbjct 2423789 ATTGTCTTTTGTCATTGGACGTTCGCCTTCGTATACTTGAATAGTTACTGTATGTTGGTT 2423848 Query 281596 ATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAAT 281655 ||||| ||| | ||| | | |||||||| |||||| || ||||||| || Sbjct 2423849 GTCTGATGCAGTAGAAAAGATTTGTGATTTTTTCGTCGGAATTACAGTATTTCTATAAAA 2423908 Query 281656 AA 281657 || Sbjct 2423909 AA 2423910 >seq1955 Length=5322578 Score = 156 bits (172), Expect = 3e-32 Identities = 149/189 (79%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 282333 TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACAT 282392 |||| || | ||||| |||| |||||| || |||||||||||||| | ||| | |||| Sbjct 904525 TTTTGTCCATGCCATATGCAAGAGCAGCTGCTGTTGGTTCATTAATTACTCTAAGTACAT 904584 Query 282393 TAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATG 282452 |||| ||||||||| || ||||||||||| ||||||||||| ||||| || || |||| Sbjct 904585 TAAGTCCAGCAATTTGACCAGCATCTTTAGTAGCTTGTCTTTGAGAATCATTGAAGTATG 904644 Query 282453 CAGGAACAGTAATAACGGCATCTGTTACT--TCTTTTCCAATATAAGCGCTTGCTGTTTG 282510 ||||||||||||| || |||| | ||||| | | || ||||| | |||||||| Sbjct 904645 CAGGAACAGTAATTACTGCATTTTTTACTGATGTATTTAAATAT--GATTCTGCTGTTTC 904702 Query 282511 TTTCATTTT 282519 ||||||||| Sbjct 904703 TTTCATTTT 904711 Score = 114 bits (126), Expect = 1e-19 Identities = 117/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 86119 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 86178 || ||||||||||| ||||| |||||||||||||||| | |||| |||| | || ||| Sbjct 904536 CCATATGCAAGAGCAGCTGCTGTTGGTTCATTAATTACTCTAAGTACATTAAGTCCAGCA 904595 Query 86179 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 86238 |||| | ||| ||| ||| |||||||| || | ||||| || ||||| || |||||| Sbjct 904596 ATTTGACCAGCATCTTTAGTAGCTTGTCTTTGAGAATCATTGAAGTATGCAGGAACAGTA 904655 Query 86239 ATAACTGCTTTATTAATAGGTTTTTGTAAATAT 86271 || ||||| || || | | | | | ||||||| Sbjct 904656 ATTACTGCATTTTTTACTGATGTATTTAAATAT 904688 Score = 93.3 bits (102), Expect = 3e-13 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 281426 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 281485 |||| ||||| || ||| ||||| ||||| | ||||||||||||||| ||||| || || Sbjct 903141 GCAGACACATGAACAATGCCATTAGCATCAATATCAAATGTGACTTCTATTTGTGGCACA 903200 Query 281486 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 281545 ||||| | |||||||| || || | | | ||||| ||| | | |||||||| || Sbjct 903201 CCTCTAGGTGCAGGTGGAATTCCAACAAGAGTAAATTGTCCTAAAAGTTTATTATCGCTA 903260 Query 281546 GTGAATTTTCGTTCACCCT 281564 | | || |||||||||| Sbjct 903261 GCCATTTCCCGTTCACCCT 903279 >seq2691 Length=2742322 Score = 111 bits (122), Expect = 1e-18 Identities = 121/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 432279 AGATTGAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATG 432338 ||||| | ||| || |||||| | || |||||||||||||||| || ||||| ||| | Sbjct 2709596 AGATTAAAAGGAAAGGAAGGTAGAATACGAGGAAATTTGATGGGTAAACGTGTTGATTTT 2709537 Query 432339 TCTGCACGTACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCT 432398 ||||| ||||| ||||||||| ||||||| ||| | || || |||| || || ||| Sbjct 2709536 TCTGCTCGTACTGTTATTACTCCTGATCCCAATTTACGGATCGATCAAGTGGGCGTGCCT 2709477 Query 432399 CTCATTATTGCGAAAAATCTTACTTTTGACGAAATTGTAAC 432439 | |||||| ||||| | || ||| ||||||||||| Sbjct 2709476 AGAAGTATTGCTCAAAATTTAACATTTCCTGAAATTGTAAC 2709436 >seq83 Length=2785093 Score = 109 bits (120), Expect = 4e-18 Identities = 141/192 (73%), Gaps = 12/192 (6%) Strand=Plus/Plus Query 131151 ATTTTATCAATAATAAA------ATAAAAATTGTAGTAGCCACAATAGCATTTGGTATGG 131204 ||||| | ||||| ||| || ||| |||| || |||||||| ||||| |||| Sbjct 2675384 ATTTTTTTAATAAAAAATTTTAGATCAAAGTTGTTTGTGCAACAATAGCTTTTGGAATGG 2675443 Query 131205 GTATTAATAAACCGGATGTTAGAGTTGTTATTCATTACGGAGCTC--CCAAGAA-TATTG 131261 |||| ||||||| |||| || |||| || || || |||| |||| | ||||| Sbjct 2675444 GTATCGATAAACCAAATGTACGATTTGTAATACA---CGCAGCTTTACCAAAATCTATTG 2675500 Query 131262 AAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGATGGAGAAAAATCTTATTGTTATG 131321 |||||||||||||||||| ||| | || ||||||||||||||||| | | ||| | Sbjct 2675501 AAGGTTATTATCAAGAAAGTGGACGCGCTGGTCGTGATGGAGAAAATGCAGACTGTATTT 2675560 Query 131322 CATTTTATAATT 131333 ||||||||||| Sbjct 2675561 TATTTTATAATT 2675572 >seq5254 Length=1170 Score = 96.9 bits (106), Expect = 3e-14 Identities = 199/295 (67%), Gaps = 11/295 (4%) Strand=Plus/Minus Query 282265 CAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTT 282324 ||| | || ||||||| || |||||||| | || ||| | ||| ||| |||| Sbjct 1163 CAATACAGAAACATCAAATGTACCACCACCAAGGTCGTAAACTAATACTTTCTCGTCTTC 1104 Query 282325 GTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCT 282384 | | |||||||||||| || |||| | | ||||| || ||||| || || | Sbjct 1103 AGCATC---TTTATCAAGACCGTAAGCAAGTGATGATGCAGTAGGCTCATTGATGATCCG 1047 Query 282385 CAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTT 282444 ||| | | ||| ||||| | || ||||| ||||| ||||| | ||||| |||||| Sbjct 1046 TTTAACTTCTAAACCGGCAATCTTACCAGCATCCTTAGTAGCTTGACGTTGTGCATCGTT 987 Query 282445 AAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGC----GC 282500 || |||||||| || || ||||| || || || |||| || || | |||| | | Sbjct 986 GAAGTATGCAGGTACGGTGATAACTGCTTCCGTAACTTTTTCACCTAAATAATCTTCAGA 927 Query 282501 TTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATA 282555 || |||| | ||| ||||||||| | ||||||| || ||||| ||| Sbjct 926 AAACTTTTTGATGTATT----GTAAAATCATGGCAGAAATTTCTTGTGGAGTATA 876 >seq2040 Length=9559734 Score = 95.1 bits (104), Expect = 9e-14 Identities = 123/167 (74%), Gaps = 5/167 (3%) Strand=Plus/Plus Query 91798 GAAGAAGACATTAAAAAAGCTTATAGAAAACTGGCTATCAAATATCATCCTGACAAAAAT 91857 || || || || |||||||| ||||||||| | || | |||||||||||||| |||||| Sbjct 8304497 GATGATGAAATAAAAAAAGCATATAGAAAATTAGCATTAAAATATCATCCTGATAAAAAT 8304556 Query 91858 AAAGGAAATCCTGAAGCCGAGGA-AATGTTCAAGAAGATTAATCATGCCAATAGTATTTT 91916 | ||| | ||| ||| || || || || ||||| ||| | | || || || | Sbjct 8304557 A---GAAGTGCTGGAGCAGAAGAGAAATTTAAAGAA-ATTGCTGAAGCTTATGAAGTTCT 8304612 Query 91917 GTCTAATTCTGAAAAGAGAAGAGTTTATGATCAATATGGTGAAGAAG 91963 ||| || || |||||||| |||||||||| ||| ||| ||||||| Sbjct 8304613 TTCTGATGCTAAAAAGAGAGAAGTTTATGATAAATTTGGAGAAGAAG 8304659 >seq317 Length=4095164 Score = 91.5 bits (100), Expect = 1e-12 Identities = 204/296 (69%), Gaps = 9/296 (3%) Strand=Plus/Plus Query 401174 ATGACGTTCTTAGATCTGTTCCTAATTTAATGGATGGATTTAAACCATCACATCGCAAAG 401233 ||||| | || ||||| | |||||| | || ||||| |||||||| ||| | |||| Sbjct 4026241 ATGACAATGTTCGATCTATACCTAATATGATCGATGGTTTTAAACCTGGACAAAGAAAAG 4026300 Query 401234 TATTTTATGGTTCTGTTGAAAAGAATATTTATAAGCAAGAGATTAAAGTATCAGATTTGA 401293 |||| ||| | | || ||| | || | |||||| ||| | ||||| || | ||| Sbjct 4026301 TATTGTATACATGT-TTAAAACG--TAATGATAAGCGCGAGGTAAAAGTTGCACAATTGG 4026357 Query 401294 CTGGTTTTGTCTC-GAATATGACGAAATATCATCATGGTGATCAATCA-TTATCATCAAC 401351 |||||| ||| | ||| || | | ||||||||||| || || |||| ||||| Sbjct 4026358 CTGGTTCTGTAGCTGAACATTCAGCA-TATCATCATGGAGAAGTTTCTCTTATG-TCAAC 4026415 Query 401352 TATTGTCGGAATGGCTCAAAATTATGTGGGAAGTAACAATCTCAATTTG-TTAATGCCAT 401410 |||| | | || ||||||| || |||||||| || | ||||| || | | || Sbjct 4026416 TATTATTAATCTTGCACAAAATTTCGTAGGAAGTAATAACATAAATTTACTTCAACCAAT 4026475 Query 401411 TGGGAATGTTTGGATCTAGATTGACCGGAGGTAAAGATTCAGCGAGTCCTAGGTAT 401466 ||| | ||||| | ||| | | ||||| |||||| ||||||||||| | ||| Sbjct 4026476 TGGTCAA-TTTGGTACAAGACTTGCAGGAGGAAAAGATGCAGCGAGTCCTCGATAT 4026530 >seq1395 Length=2354079 Score = 86.0 bits (94), Expect = 5e-11 Identities = 99/131 (76%), Gaps = 2/131 (2%) Strand=Plus/Plus Query 131173 AATTGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGT 131232 |||||| || || || |||| |||||||||||||||||||| || ||| || | | ||| Sbjct 2053545 AATTGTTGTTGCTACTGTAGCTTTTGGTATGGGTATTAATAAGCCAGATATTCGCGCTGT 2053604 Query 131233 TATTCATTACGGAGCTCCCAAGAATATT-GAAGGTTATTATCAAGAAATTGGTAGAGCAG 131291 |||||||||| | | || ||| || ||| ||| ||||||| |||| ||||| | Sbjct 2053605 TATTCATTAC-AATATGCCTGGAAGCTTCGAAAACTATATTCAAGAAGTTGGAAGAGCTG 2053663 Query 131292 GTCGTGATGGA 131302 | || |||||| Sbjct 2053664 GACGAGATGGA 2053674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740240284979796