Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_025415.1 Length=32799 Score E Sequences producing significant alignments: (Bits) Value seq4744 156 9e-34 >seq4744 Length=1121 Score = 156 bits (172), Expect = 9e-34 Identities = 326/480 (68%), Gaps = 7/480 (1%) Strand=Plus/Plus Query 27118 AGAAGTTCCAAGACTGGGTTGCTAGTGAAGTCCTCCCCGCTATCCGCAAGCATGGCGCTT 27177 ||| ||| || | |||||| | ||||| || | || ||||| | ||||||| || | Sbjct 319 AGAGGTTTAAACATTGGGTTACAAGTGAGGTATTACCAGCTATTAGACAGCATGGAGCGT 378 Query 27178 ATATGACAGACCAAAAGGCCTTCGATGTTGTTCATAACAAGAACGGGTTGATCGACCTGC 27237 | | || ||||| || ||||| ||| || || ||||||| |||| | | ||||| Sbjct 379 ACCTTACTGACCAGAAAGCCTTGGATATTATTACTAACAAGGACGGCCTAGCTGGCCTGC 438 Query 27238 TACAACAAGCCGCTGACCAGCTGAGAGAAAAAGATGTTCAGATTGAGGAAATGAAGCCAA 27297 | | ||||| ||||||||||| | |||||||| | || ||| || || | || | Sbjct 439 TTAAGCAAGCTGCTGACCAGCTTGAACAAAAAGATATCCAAATTAAGCGGTTGGAACCTA 498 Query 27298 AAGCATTATTTGCTGATTCAGTTTCTTCTAGTAGCTCA-ACTATCTCAGTTGGAGACCTT 27356 |||| ||||||| ||| ||||||| | ||| | | | ||||||| |||||| || ||| Sbjct 499 AAGCTCTATTTGCAGATACAGTTTCAGCAAGT-GATGACACTATCTTAGTTGGTGAACTT 557 Query 27357 GCCAAGATCCTCAA--GCAAAACGGCATTAACATTGGCTCTATCAGATTGTTCGCTTGGT 27414 |||||||| | || ||||| || | || |||||| | || | || ||| Sbjct 558 GCCAAGATTTTGAAAGGCAAA--GGTGTAAATATTGGCCAAAATAGGCTTTTTAAGTGGA 615 Query 27415 TACGTGATAACGGTTATTTAATCAAGCGGCAAGGCAGTGACTACAATTCACCAACGCAGT 27474 | |||||||| || ||||| || || ||| ||||||||| |||| || || || Sbjct 616 TGCGTGATAATGGCTATTTGATAAACCGGAGGGGCAGTGACCGCAATGTTCCGACTCAAA 675 Query 27475 ATTCAATGGAGCGTGGCTGGTTTGAGGTAAAAGAAACAACGGTCAACTACCCAGACGGCC 27534 | || ||||| ||| || || | ||||||||| |||| | || || || Sbjct 676 AGTCTATGGA-AATGGGACTATTCAGATTAAAGAAACAGTAATCAATCATCCTGATGGTA 734 Query 27535 GCACCCTTGTTAAGAAGACTCCGAAAGTTACTGGAAAAGGCCAGCAATACTTCGTAAACA 27594 | | ||| ||||| || ||||| ||||| |||||||||| || || || |||| Sbjct 735 AGCCAAGTATTAGAAAGACGCCAAAAGTAACTGGTAAAGGCCAGCGCTATTTTGTGAACA 794 Score = 102 bits (112), Expect = 2e-17 Identities = 209/305 (69%), Gaps = 7/305 (2%) Strand=Plus/Plus Query 26370 ACCAAAAGCATTGTTTGCTGATTCAGTTTCTTCTAGTAGCTCA-ACTATCTCAGTTGGAG 26428 ||| ||||| | ||||| ||| ||||||| | ||| | | | ||||||| |||||| | Sbjct 494 ACCTAAAGCTCTATTTGCAGATACAGTTTCAGCAAGT-GATGACACTATCTTAGTTGGTG 552 Query 26429 ACCTTGCCAAGATCCTCAA--GCAAAACGGTGTTAACATTGGTTCTATTAGATTGTTCAC 26486 | ||||||||||| | || ||||| ||||| || ||||| | ||| | || | Sbjct 553 AACTTGCCAAGATTTTGAAAGGCAAA--GGTGTAAATATTGGCCAAAATAGGCTTTTTAA 610 Query 26487 TTGGCTACGTGATAACTGTTACTTAATCAAGCGGCAAGGAAGTGACTACAATTCGCCAAC 26546 ||| | |||||||| | || || || || ||| || |||||| |||| || || Sbjct 611 GTGGATGCGTGATAATGGCTATTTGATAAACCGGAGGGGCAGTGACCGCAATGTTCCGAC 670 Query 26547 GCAGTATTCAATGGAGCGTGGCTGGTTTGAGGTAAAAGAAACAACGGTCAATTATCCAGA 26606 || | || ||||| ||| || || | ||||||||| ||||| |||| || Sbjct 671 TCAAAAGTCTATGGA-AATGGGACTATTCAGATTAAAGAAACAGTAATCAATCATCCTGA 729 Query 26607 CGGTCGCACACTTGTTAAGAAGACTCCGAAAGTCACTGGAAAAGGTCAGCAATATTTCGT 26666 ||| || | ||| ||||| || ||||| ||||| ||||| |||| ||||| || Sbjct 730 TGGTAAGCCAAGTATTAGAAAGACGCCAAAAGTAACTGGTAAAGGCCAGCGCTATTTTGT 789 Query 26667 AAACA 26671 |||| Sbjct 790 GAACA 794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104825307881572