Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_025420.1 Length=32975 Score E Sequences producing significant alignments: (Bits) Value seq4744 136 8e-28 >seq4744 Length=1121 Score = 136 bits (150), Expect = 8e-28 Identities = 353/532 (66%), Gaps = 7/532 (1%) Strand=Plus/Plus Query 27482 AACGAATCTGGTCTCTACTCCTTGATCCTTTCAAGCAAGTTGCCAAGAGCTAAGGAATTC 27541 ||||| ||||||||||| ||| || | ||||| |||| |||||| || Sbjct 267 AACGAGTCTGGTCTCTATAGCTTAATTATGAGTAGCAAAATGCCTGAGGCTAAGAGGTTT 326 Query 27542 AAGCGCTGAGTTACGAGCGAGGTTATTCCAACGATCCGGAAGCACGGCGCTTATATGACT 27601 || | || ||||| || ||||| | ||| | || | |||| || || || | ||| Sbjct 327 AAACATTGGGTTACAAGTGAGGTATTACCAGCTATTAGACAGCATGGAGCGTACCTTACT 386 Query 27602 GATCAAAAGGCCTTTGACGTTGTTCATAACAAGAGCGGGTTGATTGACCTTCTACAGCAA 27661 || || || ||||| || || || ||||||| ||| | || ||| || ||||| Sbjct 387 GACCAGAAAGCCTTGGATATTATTACTAACAAGGACGGCCTAGCTGGCCTGCTTAAGCAA 446 Query 27662 GCCGCAGACCAGCTGAGAGAAAAGAATATTCAGATTGAGGAAATGAGACCAAAAGCATTG 27721 || || |||||||| | |||| |||| || ||| || || ||| ||||| | Sbjct 447 GCTGCTGACCAGCTTGAACAAAAAGATATCCAAATTAAGCGGTTGGAACCTAAAGCTCTA 506 Query 27722 TTTGCTGATTCAGTTTCTTCTAGTAGCTCA-ACTATCTCAGTTGGAGACCTTGCTAAGAT 27780 ||||| ||| ||||||| | ||| | | | ||||||| |||||| || ||||| ||||| Sbjct 507 TTTGCAGATACAGTTTCAGCAAGT-GATGACACTATCTTAGTTGGTGAACTTGCCAAGAT 565 Query 27781 CCTCAA--GCAAAACGGAATTAACATTGGCTCTATTAGATTTTTCGCTTGGTTACGTGAC 27838 | || ||||| || | || |||||| | ||| |||| ||| | ||||| Sbjct 566 TTTGAAAGGCAAA--GGTGTAAATATTGGCCAAAATAGGCTTTTTAAGTGGATGCGTGAT 623 Query 27839 AACGGTTATTTAATCAAGCGGCAAGGCAGTGACTACAATTCACCAACGCAGTATTCAATG 27898 || || ||||| || || ||| ||||||||| |||| || || || | || ||| Sbjct 624 AATGGCTATTTGATAAACCGGAGGGGCAGTGACCGCAATGTTCCGACTCAAAAGTCTATG 683 Query 27899 GAGCGTGGCTGGTTTGAGGTAAAAGAAACAACGGTCAACTACCCAGACGGCCGCACCCTT 27958 || ||| || || | ||||||||| |||| | || || || | | Sbjct 684 GA-AATGGGACTATTCAGATTAAAGAAACAGTAATCAATCATCCTGATGGTAAGCCAAGT 742 Query 27959 GTTAAGAAGACTCCGAAAGTTACTGGAAAAGGCCAGCAATACTTCGTAAACA 28010 ||| ||||| || ||||| ||||| |||||||||| || || || |||| Sbjct 743 ATTAGAAAGACGCCAAAAGTAACTGGTAAAGGCCAGCGCTATTTTGTGAACA 794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 105388454738724