Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_025453.1 Length=40286 Score E Sequences producing significant alignments: (Bits) Value seq6632 136 1e-27 >seq6632 Length=1117 Score = 136 bits (150), Expect = 1e-27 Identities = 170/229 (74%), Gaps = 7/229 (3%) Strand=Plus/Minus Query 10552 TGTTAATCCTAATCTAGTTGCAGATTTTAGAAATATGCCTTTTGAGGATAATTCGTTTTA 10611 |||||||||| || | ||||| ||||||||||| ||||||||||| ||||| ||||| | Sbjct 889 TGTTAATCCTGATATTGTTGCTGATTTTAGAAACATGCCTTTTGATGATAACACGTTTGA 830 Query 10612 TCATGTAGTATTTGATCCTCCACATTTATTGAGAGCTGGTAGTAACAGCTGGCTGTCCAA 10671 | ||| ||||||||||||| |||||| | | ||| || | | || ||||| || Sbjct 829 TTTAGTAATATTTGATCCTCCGCATTTAATTAAAGCAGGCGATCATAGTTGGCT---AAA 773 Query 10672 AA--AATATGGAAAGCTGAATGAGCAAACTTGGAAAGAAGATATTCAAAAAGGTTTTTCG 10729 | |||||||| || ||| || |||| ||||| | || ||||||||||| Sbjct 772 GATGAATATGGAGTTTTGCCTGAAGAAGATTGGCAAGAATACATCAAAAAAGGTTTTGAT 713 Query 10730 GAATGTATGAGAGTCTTAAAACCTAACGGG-ACATTAGTTTTCAAATGG 10777 || || ||||| || |||||||| |||||| ||| || | ||||| ||| Sbjct 712 GAGTGCATGAGGGTATTAAAACC-AACGGGTACACTACTATTCAAGTGG 665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128781447196896