Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_025462.1 Length=99730 Score E Sequences producing significant alignments: (Bits) Value seq1883 91.5 9e-14 >seq1883 Length=454209 Score = 91.5 bits (100), Expect = 9e-14 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 19970 TGGAATCCTCATGATGTTGCAGATGTAGATTTACCACCTTGCCATACACTATTTCAATTC 20029 |||||||| |||| || || | | | |||||| ||||| ||| | ||||||| Sbjct 61462 TGGAATCCAATTGATATTCCAAAAATGGCTTTACCTCCTTGTCATTGTTTTGTTCAATTT 61521 Query 20030 TTTGTGAAAGATGGTAAATTATCTTGCCAGTTGTATCAACGAAGTGCTGACTTATTACTT 20089 | ||| | ||| ||||||| ||||| | |||||| ||||||| || | ||| Sbjct 61522 TATGTAAGCAATGAAGAATTATCATGCCAACTTTATCAAAGAAGTGCGGATATGGGTCTT 61581 Query 20090 GGTGTTCCATTTAATATTGCATCTTATGCTTTA 20122 ||||| ||||||||||||||||||||| ||||| Sbjct 61582 GGTGTACCATTTAATATTGCATCTTATTCTTTA 61614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318980306357246