Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_027341.1 Length=130008 Score E Sequences producing significant alignments: (Bits) Value seq1694 100 2e-16 >seq1694 Length=8743 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 60684 TATCTACCACAGGAAAATGAAGCAATTAATGATAAGTCAGGATATGCAAACTCTGTAATG 60743 ||| |||| |||||||||| |||||||||||||| || ||||| | || |||| Sbjct 5013 TATTTACCGCAGGAAAATGCTGCAATTAATGATAAAGAAGCGTATGCCGATTCAAAAATG 4954 Query 60744 ATTGCAGAAGCTGATACAAATGAACTGTTGAGTTCTGACTTTATTGTAGCTGTCCTAGAC 60803 ||||| | || ||||| || | || | ||| || || || || || || || Sbjct 4953 ATTGCTCAGGCCGATACTGATAAGCTCCTTCAAAGTGATTTAATGGTTGCCGTTCTTGAT 4894 Query 60804 GGTGCAACAATTGATGTTGGTGTAGCTAGTGAAATTGGAGTTGCTTATGCTAAAGGCATT 60863 ||| | |||||| ||| ||||| || ||||| || |||| || ||||||| ||| Sbjct 4893 GGTCTCAGTATTGATAATGGGGTAGCAAGCGAAATCGGTATTGCCTACGCTAAAGAAATT 4834 Query 60864 CCAGTTATTGGTCTGTATTCAGATTCACGTCAA 60896 || ||||||||||||| | ||| |||| ||| Sbjct 4833 CCGATTATTGGTCTGTACACGGATACACGACAA 4801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415860523386714