Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1429 86.0 8e-12 >seq1429 Length=9113309 Score = 86.0 bits (94), Expect = 8e-12 Identities = 232/350 (66%), Gaps = 4/350 (1%) Strand=Plus/Minus Query 111076 ACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC-AACGGGATAAAAATTTC 111134 ||| |||||||| |||| | ||| ||||||| ||| ||| || |||||| |||| Sbjct 7666675 ACCTATAGGTCTATGTCTAAAATTTGACTTTCTCGCT-TCTGGAATAGGATAATAATTGA 7666617 Query 111135 TGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA-TTTCATGAAGTTTTTCA 111193 || || | | || ||||| |||||||| ||||| | ||||| ||||||||| | Sbjct 7666616 CATCGATAATTTTGTCGAGATTACAAGTAACAATTTTTGTTACTTTCA-GAAGTTTTTGA 7666558 Query 111194 TAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTG 111253 ||||||| || || | | ||| ||| || | || || ||||| || ||||| Sbjct 7666557 AAATCAAATGTTTGATTATTGGGATTTACAAACATATTAACAGCAATTGAAGCTAAATTA 7666498 Query 111254 CAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTC 111313 || ||||| ||||| | | |||| | || |||||||||||| || |||| Sbjct 7666497 CACACAGCAACTTCATCTGGACTGGAATACTGCACAACTTCTGTACATAAATTACTACTC 7666438 Query 111314 TTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATG 111373 || || || || | ||| | || || || ||||| ||| || || ||||| Sbjct 7666437 TTTATTGTTCCTATATTTTGATGATTTGATTTGCGATTGCAATGATCTTTATAAAGCATA 7666378 Query 111374 TAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACATC 111423 || || || || || || || || | |||||||| |||| | ||| Sbjct 7666377 TATGGAGTTCCTGTTTCAACTTGAGAAATAAGAATAGCTGTCCATAAATC 7666328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627969620721600