Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_028669.1 Length=43012 Score E Sequences producing significant alignments: (Bits) Value seq4744 95.1 3e-15 >seq4744 Length=1121 Score = 95.1 bits (104), Expect = 3e-15 Identities = 207/306 (68%), Gaps = 3/306 (1%) Strand=Plus/Plus Query 4966 AACCAAAAATTGTATTTGCAGATGCAGTAGCTACTACTAA-GACATCAATTTTAGTTGGA 5024 |||| ||| | ||||||||||| |||| | | | | | |||| | || |||||||| Sbjct 493 AACCTAAAGCTCTATTTGCAGATACAGTTTCAGCAAGTGATGACA-CTATCTTAGTTGGT 551 Query 5025 GAGTTAGCAAAGATCATTAAACAAAACGGTATAAACATCGGGCAACGCAGATTGTTTGAG 5084 || | || ||||| | ||| || ||| |||| || || ||| || | ||| || Sbjct 552 GAACTTGCCAAGATTTTGAAAGGCAAAGGTGTAAATATTGGCCAAAATAGGCTTTTTAAG 611 Query 5085 TGGTTACGTCAAAACGGATTCCTTATTAAACGCAAGGGTGTGGATTATAACATGCCTACA 5144 ||| | ||| | || || | | || || || | ||| || || | || || Sbjct 612 TGGATGCGTGATAATGGCTATTTGATAAACCGGAGGGGCAGTGACCGCAATGTTCCGACT 671 Query 5145 CAGTATTCAATGGAACGTGAGTTATTCGAAATTAAAGAAACATCAATCACACATTCGGAC 5204 || | || |||||| | ||||| | |||||||||||| ||||| ||| | || Sbjct 672 CAAAAGTCTATGGAAATGGGACTATTC-AGATTAAAGAAACAGTAATCAATCATCCTGAT 730 Query 5205 GGTCACACATCAATTAGTAAGACGCCAAAAGTAACAGGTAAAGGACAACAATACTTTGTT 5264 ||| | || ||||| ||||||||||||||||| |||||||| || | || ||||| Sbjct 731 GGTAAGCCAAGTATTAGAAAGACGCCAAAAGTAACTGGTAAAGGCCAGCGCTATTTTGTG 790 Query 5265 AACAAG 5270 |||||| Sbjct 791 AACAAG 796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137503824086648