Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_028758.1 Length=35644 Score E Sequences producing significant alignments: (Bits) Value seq6632 136 9e-28 >seq6632 Length=1117 Score = 136 bits (150), Expect = 9e-28 Identities = 191/262 (73%), Gaps = 12/262 (5%) Strand=Plus/Minus Query 29865 ACAATTGACCTTATTTCCGCAGGATACCCTTGCCAACCTTTCAGTAATGCCGGGAAGCGA 29924 ||||||||| ||||||||| ||| | ||| || || || ||||||| |||||| | || Sbjct 354 ACAATTGACATTATTTCCGGAGGGTTCCCCTGTCAGCCATTCAGTACAGCCGGGCACCGC 295 Query 29925 AAAGGCAAGGAAGATGACCGTCACCTCTGGCCAGAAGTTGCTCGAATCTTACAGGAAATC 29984 | ||||| |||||||||||| |||||||||||||| || | |||| | || ||| Sbjct 294 AGAGGCACAGAAGATGACCGTGACCTCTGGCCAGAA-ATGTTAGAAT-TGTCAAAGAATT 237 Query 29985 CGGCCCAATTGGTTCCTTGGTGAGAATGTTGCTGGGCACATATC---TCTGGGGCTCGAT 30041 ||||||||||| || |||| |||||||||||| || | | | ||| |||||| Sbjct 236 AGGCCCAATTGGGTCGTTGGAGAGAATGTTGCT---AACTTCGCCAATATGGAGCTCGA- 181 Query 30042 GACGT--GTTATCTGACTTGGAAAGCATCGGTTACGACACGCAAGCAATTGTTATTCCGT 30099 ||| ||||||| ||||||||||| || ||||| || ||| ||||| | || Sbjct 180 -CCGTACGTTATCTAACTTGGAAAGCCAAGGCTACGAAACAAGGGCATTTGTTTTACCAG 122 Query 30100 CTTGTGCCGTCGGTGCTCCGCA 30121 || ||| |||| || || || Sbjct 121 CTGCAGCCATCGGCGCCCCACA 100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113928448839512