Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_028775.1 Length=43098 Score E Sequences producing significant alignments: (Bits) Value seq4744 91.5 4e-14 >seq4744 Length=1121 Score = 91.5 bits (100), Expect = 4e-14 Identities = 206/306 (67%), Gaps = 3/306 (1%) Strand=Plus/Minus Query 11694 CTTATTAACAAAGTATTGTTGTCCTTTGCCTGTTACTTTTGGCGTCTTACTAATTGATGT 11753 ||| || ||||| || | || ||||| || ||||||||||||||||| ||||| || Sbjct 796 CTTGTTCACAAAATAGCGCTGGCCTTTACCAGTTACTTTTGGCGTCTTTCTAATACTTGG 737 Query 11754 GTGACCGTCCGAATGTGTGATTGATGTTTCTTTAATTTCGAATAACTCACGTTCCATTGA 11813 | ||| || | ||| ||||| |||||||||||| | ||||| | |||||| || Sbjct 736 CTTACCATCAGGATGATTGATTACTGTTTCTTTAATCT-GAATAGTCCCATTTCCATAGA 678 Query 11814 ATACTGTGTAGGCATGTTATAATCCACACCCTTGCGTTTAATAAGGAATCCGTTTTGACG 11873 | || || || | || || ||| | || || || | | || || | ||| Sbjct 677 CTTTTGAGTCGGAACATTGCGGTCACTGCCCCTCCGGTTTATCAAATAGCCATTATCACG 618 Query 11874 TAACCACTCAAACAATCTGCGTTGCCCGATGTTTACACCGTTTTGTTTAATGATCTTTGC 11933 | ||||| ||| | || ||| || || |||||||| || ||| | ||||| || Sbjct 617 CATCCACTTAAAAAGCCTATTTTGGCCAATATTTACACCTTTGCCTTTCAAAATCTTGGC 558 Query 11934 TAACTCTCCAACTAAAATTGATGTC-TTAGTAGTAGCTACTGCATCTGCAAATACAATTT 11992 | || |||||||| || | |||| | | | | | |||| ||||||||||| | || Sbjct 557 AAGTTCACCAACTAAGATAG-TGTCATCACTTGCTGAAACTGTATCTGCAAATAGAGCTT 499 Query 11993 TTGGTT 11998 | |||| Sbjct 498 TAGGTT 493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137778998119120