Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_028821.1 Length=40670 Score E Sequences producing significant alignments: (Bits) Value seq4744 80.6 7e-11 >seq4744 Length=1121 Score = 80.6 bits (88), Expect = 7e-11 Identities = 174/259 (67%), Gaps = 1/259 (0%) Strand=Plus/Minus Query 34501 TTATTAATAAAGTATTGTTGTCCTTTACCTGTTACTTTTGGCGTCTTACTAATTGATGTA 34560 || || | ||| || | || |||||||| ||||||||||||||||| ||||| || Sbjct 795 TTGTTCACAAAATAGCGCTGGCCTTTACCAGTTACTTTTGGCGTCTTTCTAATACTTGGC 736 Query 34561 TGACCATCTGAATGTGTGATTGATGTTTCCTTAATTTCGAACAACTCACGTTCCATTGAG 34620 | |||||| | ||| ||||| |||||| ||||| | ||| | | |||||| || Sbjct 735 TTACCATCAGGATGATTGATTACTGTTTCTTTAATCT-GAATAGTCCCATTTCCATAGAC 677 Query 34621 TATTGTGTCGGCATGTTGTAGTCGACACCTTGACGTTTAATTAAGAAACCGTTTTGTCGT 34680 | ||| ||||| | ||| ||| || || || || || | || || | || Sbjct 676 TTTTGAGTCGGAACATTGCGGTCACTGCCCCTCCGGTTTATCAAATAGCCATTATCACGC 617 Query 34681 AACCATTCAAACAATCTTCGTTGTCCGATATTGACACCATTCTGTTTAATGATTTTCGCC 34740 | ||| | ||| | || ||| || ||||| ||||| || ||| | || || || Sbjct 616 ATCCACTTAAAAAGCCTATTTTGGCCAATATTTACACCTTTGCCTTTCAAAATCTTGGCA 557 Query 34741 AACTCACCCACTAAGATAG 34759 | ||||| |||||||||| Sbjct 556 AGTTCACCAACTAAGATAG 538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130010131248864