Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_028837.1 Length=41149 Score E Sequences producing significant alignments: (Bits) Value seq6632 132 1e-26 >seq6632 Length=1117 Score = 132 bits (146), Expect = 1e-26 Identities = 190/262 (73%), Gaps = 12/262 (5%) Strand=Plus/Minus Query 33570 ACAATTGACCTTATTTCCGCGGGATACCCTTGCCAACCTTTCAGTAATGCCGGGAAGCGA 33629 ||||||||| ||||||||| || | ||| || || || ||||||| |||||| | || Sbjct 354 ACAATTGACATTATTTCCGGAGGGTTCCCCTGTCAGCCATTCAGTACAGCCGGGCACCGC 295 Query 33630 AAAGGCAAGGAAGATGACCGTCACCTCTGGCCAGAAGTTGCTCGAATCTTACAGGAAATC 33689 | ||||| |||||||||||| |||||||||||||| || | |||| | || ||| Sbjct 294 AGAGGCACAGAAGATGACCGTGACCTCTGGCCAGAA-ATGTTAGAAT-TGTCAAAGAATT 237 Query 33690 CGGCCCAATTGGTTCCTTGGTGAGAATGTTGCTGGGCACATATC---TCTGGGGCTCGAT 33746 ||||||||||| || |||| |||||||||||| || | | | ||| |||||| Sbjct 236 AGGCCCAATTGGGTCGTTGGAGAGAATGTTGCT---AACTTCGCCAATATGGAGCTCGA- 181 Query 33747 GACGT--GTTATCTGACCTGGAAAGCATCGGTTACGACACGCAAGCAATTATTATTCCGG 33804 ||| ||||||| || |||||||| || ||||| || ||| || || | || | Sbjct 180 -CCGTACGTTATCTAACTTGGAAAGCCAAGGCTACGAAACAAGGGCATTTGTTTTACCAG 122 Query 33805 CTTGTGCCGTCGGTGCCCCGCA 33826 || ||| |||| ||||| || Sbjct 121 CTGCAGCCATCGGCGCCCCACA 100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 131542786615772