Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_028841.1 Length=44952 Score E Sequences producing significant alignments: (Bits) Value seq6632 120 9e-23 >seq6632 Length=1117 Score = 120 bits (132), Expect = 9e-23 Identities = 186/263 (71%), Gaps = 2/263 (1%) Strand=Plus/Minus Query 38003 ACAATTGACCTTATTTCCGCAGGATACCCTTGCCAACCTTTCAGTAATGCCGGGAAGCGA 38062 ||||||||| ||||||||| ||| | ||| || || || ||||||| |||||| | || Sbjct 354 ACAATTGACATTATTTCCGGAGGGTTCCCCTGTCAGCCATTCAGTACAGCCGGGCACCGC 295 Query 38063 AAAGGCAAGGAAGATGACCGTCACCTCTGGCCAGAAGTTGCTCGGCTCCTACAGGAAATT 38122 | ||||| |||||||||||| |||||||||||||| || | | | | || |||| Sbjct 294 AGAGGCACAGAAGATGACCGTGACCTCTGGCCAGAA-ATGTTAGAATTGT-CAAAGAATT 237 Query 38123 CGGCCCCATTGGTTCCTCGGTGAGAATGTTGCTGGGCACATCACTTTGGGGCTCGATGAT 38182 ||||| ||||| || | || |||||||||||| | || | ||| |||||| | Sbjct 236 AGGCCCAATTGGGTCGTTGGAGAGAATGTTGCTAACTTCGCCAATATGGAGCTCGACCGT 177 Query 38183 GTGCTATCTGACTTGGAAAATCTTGAATACACCACGCAAGCATTTATTGTTCCAGCTTGT 38242 | ||||| ||||||||| | | ||| || |||||| || | |||||| Sbjct 176 ACGTTATCTAACTTGGAAAGCCAAGGCTACGAAACAAGGGCATTTGTTTTACCAGCTGCA 117 Query 38243 GCCGTCGGGGCCATACACCGAAG 38265 ||| |||| ||| ||| | ||| Sbjct 116 GCCATCGGCGCCCCACATCAAAG 94 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143711238307528