Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_029009.1 Length=147589 Score E Sequences producing significant alignments: (Bits) Value seq6456 84.2 2e-11 >seq6456 Length=1742 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 62615 TCAGCAAAAGAATGGATTGCACAAAAAGAATCTAGCGGTTCTTACTCAGCAACTAACGGA 62674 || || || | |||||||||| | ||||| |||| || ||| || ||||| Sbjct 1351 TCTGCTAAGGCATGGATTGCAAATCGTGAATCAGGCGGCTCATACAGTGCTCAAAACGGC 1292 Query 62675 CGTTACATTGGACGTTACCAATTAGATGCTTCATACTTAAACGGTGACTACTCACCAGAA 62734 | |||||||| |||||| | ||||||||| | |||||||||||||| | | Sbjct 1291 CAATACATTGGTAAATACCAACTTTCAGCTTCATACCTTAACGGTGACTACTCTGCTGCC 1232 Query 62735 AACCAAGAACGTGTAGCAGATGCTTATGTTGCAGGACGTTATGGTTCATGGGAAAACGCA 62794 |||||||||||||| || | ||||||||| || |||||||||||| | || Sbjct 1231 AACCAAGAACGTGTTGCCAACAGTTATGTTGCTAACCGGTATGGTTCATGGTCAGCTGCT 1172 Query 62795 CAAGCTTTCTGGTTAGCTAACGGTTGGTACTAA 62827 | || || ||| ||| || || ||||||||| Sbjct 1171 AAGGCCTT-TGGCAAGC-AATGGCTGGTACTAA 1141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472109903025840