Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_029030.1 Length=31075 Score E Sequences producing significant alignments: (Bits) Value seq2131 96.9 7e-16 >seq2131 Length=5454 Score = 96.9 bits (106), Expect = 7e-16 Identities = 215/321 (67%), Gaps = 4/321 (1%) Strand=Plus/Plus Query 9156 TCAGCAGACCATGAACGCAACATGGCTTACCTTGACTGGTAATGCTGATAAAGGCAAGGC 9215 ||| ||||| ||||| || |||||||| ||| | ||||| ||||||| ||| || ||| | Sbjct 539 TCAACAGACAATGAATGCGACATGGCTAACCCTTACTGGAAATGCTGGTAAGGGTAAGTC 598 Query 9216 CATGACCAAAGCCATCACGGATATGGCATCTCAAGCACAGAATAGCCTTGAGATGGTCGA 9275 ||| || || ||||||||| || ||| || || || ||||| || Sbjct 599 AATGGTTAAGCAGATTGATGATATGGCAGCTGCAGCTCAAAACTCAACTGCAATGGTTGA 658 Query 9276 TAAGCTAAACCAGAAAATCTATGCTATCGGCGAGAATGCAGACCAAGCAAAAAAGACGAC 9335 || || | || ||| ||||||| ||| | | || | | || | || | Sbjct 659 CAATCTTAGTCAAAAATTCTATGCAATCAACAAAGATCCTAATCAGACCGGTAATTTGGT 718 Query 9336 TAAGGCCATTTTGACCTTGCAAGACGCTTTTGGGCAAACAGATGAAGCAGTAGAAAACTT 9395 || | | ||||| | ||||| || |||||| |||| ||||| || |||||||| Sbjct 719 CAAATCGGTGCTGACCCTTCAAGATGCCTTTGGGAAAACCGATGATCAGGTTGAAAACTT 778 Query 9396 TGGTACTCAG--TGGTCGCAAATGCTTGCAAATGGCAAGGTCCAAGGGCAAGACATGCTG 9453 |||||| ||| |||| |||||| | || |||||||| || | ||||||||| || Sbjct 779 TGGTACGCAGTTTGGT--CAAATGATGGCCAATGGCAAAGTGTCTGCACAAGACATGATG 836 Query 9454 TCCATTATCAACACGTTTCCT 9474 || || ||||| |||||| Sbjct 837 TCTTTTGTCAACGTCTTTCCT 857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 99309028439924