Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_031064.1 Length=36202 Score E Sequences producing significant alignments: (Bits) Value seq6528 93.3 1e-14 >seq6528 Length=1832 Score = 93.3 bits (102), Expect = 1e-14 Identities = 186/269 (69%), Gaps = 10/269 (4%) Strand=Plus/Minus Query 6288 AAGAATTCAATCAAGCTGGAATAACCGCAGAAGTGGTTCATGGTAAAACTCCAAAAACCG 6347 ||||||| || |||| ||||| || ||| ||| ||| ||||||| || |||| | || Sbjct 453 AAGAATTTAACGAAGCAGGAATTACTGCAAAAGAAGTTGATGGTAATACGCCAATAGTCG 394 Query 6348 AACGCGAAGCTATCATGAATCAATTTAGAGCTGGTGAAATATTAG---TTCTGATTAATG 6404 || | || || | | | || ||| | ||| |||| | || |||||| Sbjct 393 AAAGGGATGCAGTAGTTTCCGATTTCAGAAATC---AAAAATTAAAGATACTCGTTAATG 337 Query 6405 TTGAGTTATTCACTGAAGGAGTTGACTTACCAGATG-TGACGACTTGCATTATGCTAAGA 6463 | | | || || ||||| ||||||||||| ||| |||| | | || ||| |||| Sbjct 336 TAAATCTGTTTACCGAAGGTGTTGACTTACCCAATGTTGACTGCGT-AATCATGGCAAGA 278 Query 6464 CCAACTCAATCACTCAGC-CTATTCTTACAATTTGCAATGAGGCCATTAAATCCTAAACC 6522 ||||| |||| | ||| || || ||||| ||| |||||||| |||||||| | ||| Sbjct 277 CCAACCACATCA-TTAGCACTGTTTTTACAGTTTTCAATGAGGTGTTTAAATCCAAGACC 219 Query 6523 TGGTAAAACAGCGATTCTGATTGACCACG 6551 ||| || || || ||| | |||||||||| Sbjct 218 TGGCAAGACTGCAATTATCATTGACCACG 190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 115713880352528