Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20mellifera_20[refseq_20GCF_5F000002195.4_202011-01-14] 5,321 sequences; 250,287,000 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq15 105 7e-18 >seq15 Length=10167229 Score = 105 bits (116), Expect = 7e-18 Identities = 141/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 16793 AATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGA 16852 |||||||| || |||||||| |||||||| ||||| | || || ||||| ||||| | Sbjct 2292688 AATCTATCTGCAACAAATTCGATATATTGACACATAAGTTTACAATTCATGCCTATCATT 2292747 Query 16853 CGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912 || || | || || ||||||||| ||| || || || || || |||||||| Sbjct 2292748 TCAACAGGTAATGCATCTGTCAAAAATTCTTGTTCAATTTTGACAGCATCTTTAATAATT 2292807 Query 16913 CTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAA 16972 | |||||||| || ||| | ||| || ||||| ||||| | |||||| ||| Sbjct 2292808 GATGTGACTCGTTCACAAGATGGTTTTTGTACAATGTGTTTGAACATTAAACATGCAAAA 2292867 Query 16973 TCGCAATGTAATCCCT 16988 || ||||||||||||| Sbjct 2292868 TCACAATGTAATCCCT 2292883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517511176748280