Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20mellifera_20[refseq_20GCF_5F000002195.4_202011-01-14] 5,321 sequences; 250,287,000 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq10 208 1e-48 seq6 181 2e-40 seq8 159 5e-34 seq1 156 6e-33 seq4 145 1e-29 >seq10 Length=12965953 Score = 208 bits (230), Expect = 1e-48 Identities = 397/575 (69%), Gaps = 11/575 (2%) Strand=Plus/Plus Query 203113 ATGTTCATTTAGTGTTTTTATTGCCCAATTATTAGCACCATTTATATTATCGTAATTTTC 203172 ||| | ||||| ||||| ||| |||||| || ||||| | || ||| || ||||| Sbjct 7286634 ATGCTTATTTAATGTTTCTATAGCCCAAGGATAGGCACCTTCAATTAGATCATATTTTTC 7286693 Query 203173 ATTATAATAACAAAAATTATCACATAGTTCTTTACGAATAATAGCTTCTT-CACAAAAAA 203231 ||||||| | ||||||||||||| |||||||| | |||||||||||||| || ||| | Sbjct 7286694 ATTATAAAAGCAAAAATTATCACTAAGTTCTTTTCTAATAATAGCTTCTTCCATAAAGGA 7286753 Query 203232 CTTCTACCGATTTAGGATATAATTTTTTATATTTGTTAATTTCTAATATTATTCTTTGAG 203291 | || || || || ||||||||||||||| | || ||||| || || | ||| Sbjct 7286754 C-TCAACTGACTTTTTATATAATTTTTTATACTCTTTTATTTCCAAAATACAACGTTGTA 7286812 Query 203292 TTGAAATTTGACCAAAATGTATCCATGGTGATAAATTACTTATTGCATTAGCATTTGGAT 203351 ||| || |||||||| | ||| ||||||||||| || || ||||| | |||| Sbjct 7286813 CTGAGATCATGCCAAAATGAAACCAAGGTGATAAATTGCTAATGGCATTTGATAAAGGAT 7286872 Query 203352 CATTTCtttttttagcataatcttttaatctattttgtataaatatatctaatattttaa 203411 ||| | || | |||| | |||||| | ||| |||| || | || | | |||| Sbjct 7286873 TATTACGTTCATCTCCATATTTTTTTAAACGATTCTGTAAGAAATTTTCAAGTTCCTTAA 7286932 Query 203412 atgcatattttGTA-CCAGATTTTGCCCAAGAAACAGGTTTAACATTTCTATCAATATTT 203470 ||| ||| || || | || ||||| | || ||| || | || | | | Sbjct 7286933 TACCAT-TTTCATATCCTGGCTTAGCCCATGTAATTTCTTTTACTGACTTGTCTACTTCT 7286991 Query 203471 AATGATTGTTCTGCttttttccaattattattt----attttaatatatgtattataagt 203526 | |||| ||| ||||||||||||| ||| | ||| | | ||| |||| | Sbjct 7286992 ACATTTTGTAAAGCTATTTTCCAATTATTTTTTTCAAACTTTTCT-TTTGTTGTATATGG 7287050 Query 203527 atgtttaataataggtataaattCAGTTAAATATTCTGATAATTTATAATTTATTTTATT 203586 |||||| |||| |||| |||||| |||||| |||| || ||| |||||||||||| Sbjct 7287051 ATGTTTTATAACAGGTGGAAATTCTGTTAAAAATTCCTCTAGTTTTGTATTTATTTTATT 7287110 Query 203587 TCTAATGGTTTTTGCAGAATATTC-TAATTTATTACTAGCAATCCAACATGGTACAATAT 203645 |||||| ||||| |||| | |||| | ||| | | ||| |||||| || ||||||| Sbjct 7287111 TCTAATTGTTTTAGCAGCAAATTCTTGCTTTGATGAT-GCATACCAACAAGGCACAATAT 7287169 Query 203646 TATGTGAATCAACTTGATAAACATCAATATTTATT 203680 |||| | ||| || | ||| || |||| |||| Sbjct 7287170 TATGAGCATCTACCTTTAAAAGATATATATATATT 7287204 Score = 165 bits (182), Expect = 1e-35 Identities = 181/243 (74%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 202868 CCAACATATCCATTTGGATCACGTCCATCTATAAAATATTTATCATTTAAATNNNNNNNN 202927 || ||||| ||||| ||||||| ||||||||| ||| |||| |||||||| Sbjct 7286324 CCTACATAACCATTAGGATCACAACCATCTATACTATACTTATTATTTAAATAATTGGCC 7286383 Query 202928 NNNNNNAATGCTTCTTCTGGTGATTTTGTCCATTCTAATAtttttttAGCCCAATACATT 202987 || || ||| || | || ||||||||||||||||| || |||||||||||| Sbjct 7286384 CATTTTAAAGCAATTTCAGGAGTTTCAGTCCATTCTAATATTTTCTTTGCCCAATACATT 7286443 Query 202988 CTTAAATATCCATGCAT-TTTACCATAGATAATCATTTGTTTTTGTGATGCATTCCATAA 203046 |||||| | |||||||| ||| | || | | | |||||| ||||| |||||||||| || Sbjct 7286444 CTTAAAAACCCATGCATCTTTCCTATTG-TTACCATTTGATTTTGACATGCATTCCACAA 7286502 Query 203047 ATTGTCATGAGTTAATGCATTTTCAAGTTGATATAAACTATATATATGTTTTCTAGTATC 203106 || ||||||||| || |||||| | |||| |||| |||||||| |||||| |||| Sbjct 7286503 ATCATCATGAGTTTCTGAATTTTCCAAATGATTTAAAAAATATATATATTTTCTTTTATC 7286562 Query 203107 ATT 203109 || Sbjct 7286563 CTT 7286565 Score = 141 bits (156), Expect = 1e-28 Identities = 202/274 (74%), Gaps = 9/274 (3%) Strand=Plus/Plus Query 203714 ATTTTAATAGGATAAAAATCAACAATCAATA-CACCAATATTATAtttttttATAAATTT 203772 |||||||| ||||||||||| ||| |||| | || ||||||||| ||||||||||||| Sbjct 7287312 ATTTTAAT-GGATAAAAATCTGTAAT-AATAGCTCCCATATTATATATTTTTATAAATTT 7287369 Query 203773 TGGTAATACATCTACTGATATTCCTATC-AATAGATGAAAATGTATATTTAAATTTTTAC 203831 | |||| | || | | | || || |||||||||| ||||||||| ||||||| Sbjct 7287370 AAG-AATATTTATATTTGGTTCACCATGTAAAAGATGAAAATTTATATTTAATTTTTTAC 7287428 Query 203832 ATTCTTCTTCCATTTGTTTAACACCATTCAACATAAAATCAAATTGTCTAATTGTAGCAT 203891 |||||| ||| |||| || | || |||| | ||| | | | | ||| || | ||||| Sbjct 7287429 ATTCTTTTTCGATTTCTTCTAATCCTTTCAGAAGAAATTTATAATATCTTATAGAAGCAT 7287488 Query 203892 TAAGAAATTCTGGTACTAAACATATACACATATGTAATG--ACGATTTTGATTTTAATGC 203949 ||||||| | || || ||| || | ||| ||||| | || || ||| | |||||| || Sbjct 7287489 TAAGAAAGTTTGATATTAAGCAAAAACATATATGAAGTGGTAC-ATTAT-TTTTTAAAGC 7287546 Query 203950 TAATTCTTGTGCATAAATTAAACCCCAATTATCT 203983 | || ||| ||| ||| ||| ||||||||||| Sbjct 7287547 TGCTTTTTGAGCAAAAAGTAATGCCCAATTATCT 7287580 Score = 105 bits (116), Expect = 1e-17 Identities = 120/160 (75%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 202712 ATATAAGTCTAATTGTTATTTTTATAAT--ATTTTTTAATAAATAAATCAACATCAAATT 202769 |||||||| | | ||| ||||| | |||| ||| |||| | ||| | ||||| Sbjct 7286069 ATATAAGTTCATTAGTTTTTTTTTTCCCCCATTTCATAACAAATTCAGCAATGTTAAATT 7286128 Query 202770 TACGTCTACATCCTTCATAACTCATATATCTAATTTTACCAAATATTGGTCTTTCTTTCC 202829 | ||| |||| ||||||||| |||||||||||||||| |||||||| ||||||| || Sbjct 7286129 TTCGTTTACAGCCTTCATAATTCATATATCTAATTTTTCCAAATATATCTCTTTCTGGCC 7286188 Query 202830 ATGCTCTATCATGAATACCACAAATTGACCACATACATCC 202869 | | |||||| | |||||| || ||||||||||| || Sbjct 7286189 AACCATGATCATGGACACCACAGATAGACCACATACAACC 7286228 >seq6 Length=18472937 Score = 181 bits (200), Expect = 2e-40 Identities = 183/238 (77%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | || ||| | ||||| ||||| |||||| | ||| |||| || Sbjct 4824510 ATGCAGATCTTTGTCAAAACATTGACAGGTAAAACAATAACTCTGGAGGTTGAGGCCTCA 4824569 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| ||||| |||||||||||| || ||||| || ||||| ||||| Sbjct 4824570 GATACCATTGAAAATGTAAAAGCGAAAATTCAAGACAAGGAAGGAATTCCACCAGATCAG 4824629 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| | || ||||| || ||||||||||| ||| | || |||||| ||||||||| Sbjct 4824630 CAAAGATTGATCTTTGCTGGTAAACAATTAGAAGATGGGCGTACATTATCTGATTATAAT 4824689 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||||||||| ||||| | ||||| || |||||||| ||||||| || ||| || Sbjct 4824690 ATTCAAAAAGAGTCAACACTACATTTAGTACTACGTTTAAGAGGTGGAATGCAAATTT 4824747 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| || || || |||||||| ||| | || ||||||| | Sbjct 4826562 ATGCAAATTTTTGTCAAGACTCTCACGGGTAAAACTATTACTCTTGAAGTTGAAGCTTCT 4826621 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || |||||| ||| ||||| ||||||||||| ||||||||||| || ||||||||| Sbjct 4826622 GACACAATTGAAAATGTAAAAGCAAAAATTCAAGACAAAGAAGGTATTCCTCCTGATCAA 4826681 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || || | |||||||| || ||||| | || ||| |||| ||| | ||||||||| Sbjct 4826682 CAGAGATTGATTTTTGCTGGTAAACAGCTGGAAGATGGTCGTACACTTTCCGATTATAAT 4826741 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 |||||||||||||| ||| | || | || | ||| | ||||||||| Sbjct 4826742 ATTCAAAAAGAATCGACTCTTCACCTTGTACTTCGTCTCCGAGGTGGT 4826789 Score = 163 bits (180), Expect = 4e-35 Identities = 181/239 (76%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | ||||| || || || ||||| || ||| | ||| |||||||| Sbjct 4825878 ATGCAAATTTTCGTTAAGACTCTTACCGGAAAAACCATCACTTTGGAGGTTGAAGCATCC 4825937 Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| || ||| ||||||| |||||||||||||| || ||||| || || ||||| Sbjct 4825938 GATACTATCGAAAATGTTAAAACT-AAAATTCAAGATAAGGAGGGTATTCCTCCAGATCA 4825996 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || || | |||||||| || ||||| | || ||| |||| ||| | |||||||| Sbjct 4825997 GCAGAGATTGATTTTTGCTGGTAAACAGCTGGAAGATGGTCGTACACTTTCGGATTATAA 4826056 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 |||||||||||||||||| || ||||| || || ||||| ||||||| || ||| || Sbjct 4826057 TATTCAAAAAGAATCAACATTACATTTAGTATTGCGTTTGAGAGGTGGAATGCAAATTT 4826115 Score = 161 bits (178), Expect = 1e-34 Identities = 179/239 (75%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | || ||||| || || |||||||| ||| |||| ||||||| Sbjct 4824965 AATGCAAATTTTTGTCAAAACACTCACTGGAAAAACTATTACTTTAGAAGTTGAAGCTTC 4825024 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| ||| | ||| |||||||| |||||||||||||| || |||||||| Sbjct 4825025 AGATACTATTGAAAATGTTAAAGCCAAAATTCAGGATAAAGAAGGTATTCCTCCTGATCA 4825084 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| || | || ||||| || |||||| | || ||| |||| || | ||||| || Sbjct 4825085 ACAGAGATTAATCTTTGCCGGTAAACAACTGGAAGATGGTCGTACTCTTTCCGATTACAA 4825144 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||||||||||||| || | ||| | ||||| || | || |||||||| ||| || Sbjct 4825145 TATTCAAAAAGAATCTACACTTCATCTTGTTTTGCGACTTCGCGGTGGTATGCAAATTT 4825203 Score = 159 bits (176), Expect = 5e-34 Identities = 178/238 (75%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | || || || ||||| || ||||| ||| | || | ||||| | Sbjct 4825650 ATGCAAATTTTCGTCAAAACCCTTACAGGAAAGACTATTACTCTTGAAGTAGAAGCTTCT 4825709 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| ||||| || |||||||| ||||||||||| || ||||| ||| Sbjct 4825710 GATACTATTGAAAATGTAAAAGCTAAGATTCAAGACAAAGAAGGTATTCCTCCTGACCAA 4825769 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| | || ||||| |||||||||||||| ||| |||| || | ||||| ||| Sbjct 4825770 CAAAGATTGATCTTTGCTGGAAAACAATTAGAAGATGGTCGTACTCTTTCCGATTACAAT 4825829 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 |||||||||||||| || | ||| | ||| |||| | || |||||||| ||| || Sbjct 4825830 ATTCAAAAAGAATCTACACTTCATCTCGTTCTACGACTTCGTGGTGGTATGCAAATTT 4825887 Score = 159 bits (176), Expect = 5e-34 Identities = 181/240 (75%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| || | || || || || || ||||| || ||| | ||| |||||||| Sbjct 4826105 AATGCAAATTTTCGTCAAAACTCTTACCGGAAAAACCATCACTTTGGAGGTTGAAGCATC 4826164 Query 124598 TGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 ||||| ||| ||| ||||||| |||||||||||||| || ||||| || || |||| Sbjct 4826165 CGATACTATTGAAAATGTTAAAACT-AAAATTCAAGATAAGGAGGGTATCCCTCCAGATC 4826223 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 | || || | |||||||| || |||||| | || ||| |||| ||| | ||||| | Sbjct 4826224 AGCAGAGATTGATTTTTGCTGGTAAACAACTGGAAGATGGTCGTACACTTTCGGATTACA 4826283 Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||||||||||||||||| | ||||| || || ||||| ||||| || || ||| || Sbjct 4826284 ATATTCAAAAAGAATCAACACTACATTTAGTATTGCGTTTGCGAGGAGGAATGCAAATTT 4826343 Score = 154 bits (170), Expect = 2e-32 Identities = 177/238 (74%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | || || || ||||| |||||||| ||| | || | ||||| | Sbjct 4825194 ATGCAAATTTTCGTCAAAACCCTTACAGGAAAAACTATTACTCTTGAAGTAGAAGCTTCT 4825253 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| ||||| || |||||||| ||||||||||| || ||||| ||| Sbjct 4825254 GATACCATTGAAAATGTAAAAGCTAAGATTCAAGACAAAGAAGGTATTCCTCCTGACCAA 4825313 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || || | || ||||| |||||||||||||| ||| |||| || | ||||| ||| Sbjct 4825314 CAGAGATTGATCTTTGCTGGAAAACAATTAGAAGATGGTCGTACTCTTTCCGATTACAAT 4825373 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||||||||| || || | ||| | ||||| || | || |||||||| ||| || Sbjct 4825374 ATTCAAAAAGAGTCTACACTTCATCTTGTTTTGCGACTTCGTGGTGGTATGCAAATTT 4825431 Score = 152 bits (168), Expect = 8e-32 Identities = 177/239 (74%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | || ||||| || || |||||||| ||| |||| ||||||| Sbjct 4824737 AATGCAAATTTTTGTCAAAACACTCACTGGAAAAACTATTACTTTAGAAGTTGAAGCTTC 4824796 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| ||| | ||| |||||||| |||||||||||||| || |||||||| Sbjct 4824797 AGATACTATTGAAAATGTTAAAGCTAAAATTCAGGATAAAGAAGGTATTCCTCCTGATCA 4824856 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| || | || ||||| || ||||| | || ||| |||| || | ||||| || Sbjct 4824857 ACAGAGATTGATCTTTGCCGGTAAACAGCTGGAAGATGGTCGTACTCTTTCCGATTACAA 4824916 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||||||||||||| || | ||| | ||||| || | || ||||| || ||| || Sbjct 4824917 TATTCAAAAAGAATCTACACTTCATCTTGTTTTGCGACTTCGTGGTGGAATGCAAATTT 4824975 Score = 145 bits (160), Expect = 1e-29 Identities = 175/238 (74%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | || || || ||||| || ||||| ||| | || ||||||| Sbjct 4825422 ATGCAAATTTTCGTCAAAACCCTTACAGGAAAGACTATTACTCTCGAAGTTGAAGCTTCA 4825481 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | ||| |||||||| |||||||||||||| || || |||||| Sbjct 4825482 GATACCATTGAAAATGTTAAAGCCAAAATTCAGGATAAAGAAGGTATTCCTCCAGATCAA 4825541 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || || | || ||||| || |||||| | || ||| |||| || | ||||||||| Sbjct 4825542 CAGAGATTGATCTTTGCCGGTAAACAACTGGAAGATGGTCGTACTCTTTCCGATTATAAT 4825601 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 |||||||||||||| || | ||| | ||| |||| | || |||||||| ||| || Sbjct 4825602 ATTCAAAAAGAATCGACCCTTCATCTCGTTCTACGACTTCGCGGTGGTATGCAAATTT 4825659 Score = 143 bits (158), Expect = 4e-29 Identities = 175/239 (73%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| || | || || || ||||| || ||||| ||| | || | ||||| Sbjct 4826333 AATGCAAATTTTCGTCAAAACTCTTACAGGAAAGACTATTACTCTTGAAGTAGAAGCTTC 4826392 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| ||| | ||| ||||||||||| ||||||||||| || |||||||| Sbjct 4826393 CGATACCATTGAAAATGTGAAAGCCAAAATTCAAGACAAAGAAGGTATTCCCCCTGATCA 4826452 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| || | || ||||| || |||||| | |||||| |||| || | ||||| || Sbjct 4826453 ACAGAGATTAATCTTTGCTGGTAAACAACTGGAGGATGGTCGTACTCTTTCCGATTACAA 4826512 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 |||||||||||| || || | ||| | ||||| || | || |||||||| ||| || Sbjct 4826513 TATTCAAAAAGAGTCTACACTTCATCTTGTTTTGCGACTTCGTGGTGGTATGCAAATTT 4826571 >seq8 Length=13546544 Score = 159 bits (176), Expect = 5e-34 Identities = 202/273 (74%), Gaps = 5/273 (2%) Strand=Plus/Minus Query 205709 TATAATTTGTATCCATATCAATATATTTAGCACCAAAATGACGCCATTGAAAACCATAAA 205768 |||||| | | | |||||| ||||| | ||||||||||| | ||||||||| ||||||| Sbjct 1794539 TATAATCTTTGTACATATCTTTATATGTTGCACCAAAATGTCTCCATTGAAATCCATAAA 1794480 Query 205769 CTGGACCTAAATCACCTTCTTTTCTATCATTAAAACCACGtttttttatatattttaatg 205828 ||||||||||| ||||||| |||||| ||||||||| | || ||| || Sbjct 1794479 TAGGACCTAAATCTCCTTCTTCTCTATCTATAAAACCACAAGAATCTAAGAATTCACGTG 1794420 Query 205829 atccattttcatcccaaatatgga-ttcctttattttttaGAATATTTGTATTAGTTGAT 205887 | | |||| ||||||||||||| | |||||| | ||| | |||| ||| || ||| Sbjct 1794419 AACTATTTGCATCCCAAATATGAACATCCTTT-TCACTTAATTTCTTTGCATTTGTGGAT 1794361 Query 205888 CCAGATATAAACCATAATAATTCTTCAACAATTCCTCTCCAAAACATTGATTTTGTTGTA 205947 || ||||||||||| ||||| || || | ||| ||||||| | |||||| || Sbjct 1794360 CCTTTAATAAACCATAACAATTCCTCCACTACACCTTTCCAAAATACGCGTTTTGTAGTT 1794301 Query 205948 AATAATGGAAATGAATCATCTAAT--TTATATT 205978 |||||||||||| ||| | |||| ||||||| Sbjct 1794300 AATAATGGAAATATATC-TATAATAATTATATT 1794269 Score = 159 bits (176), Expect = 5e-34 Identities = 194/263 (74%), Gaps = 5/263 (2%) Strand=Plus/Minus Query 205435 TTTAAATTAGTTAAATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAAT 205494 || || || || | |||||| | |||||| | |||||| |||| |||| ||||||| Sbjct 1794892 TTCAAGTTTGTAATATGTGCCAGTATATAAATTAATAAAGAATAAGATGCAATATTAAAT 1794833 Query 205495 GGTACACCTAAACCCATATCAGCTGATCTTTGATACATTTGACATGTAAGATATTTATT- 205553 |||||||| | ||||||||| || ||||||||| | ||| |||| ||| || || Sbjct 1794832 GGTACACCAAGACCCATATCCGCACTTCTTTGATAAAGTTGGCATG----ATAATTCTTC 1794777 Query 205554 ATTAATTACATGAAATTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATC 205613 ||| |||||| |||||| || |||||||||||||| |||| | |||| ||| || ||| Sbjct 1794776 ATTGCTTACATAAAATTGAACGAAACAATGACAAGGAGGTAAAGCCATTTTTGGAATATC 1794717 Query 205614 TATAGGATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttattttttattttatt 205673 || |||||||| ||||| | ||| || ||||| | || || | ||| |||| Sbjct 1794716 AATTGGATTCCATGCTGTCATTATAATTCTTCTATCATTGGGAGAATATCGTATCTTATC 1794657 Query 205674 tatAATATGTGTTAATTGATCAA 205696 ||||| | | |||||||||||| Sbjct 1794656 TATAACTTCTTTTAATTGATCAA 1794634 >seq1 Length=29893408 Score = 156 bits (172), Expect = 6e-33 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | || || ||||| || |||||||| ||| | ||| ||||||| Sbjct 27602322 AATGCAAATCTTTGTCAAAACTCTAACTGGAAAAACTATCACTCTTGAGGTTGAAGCTTC 27602263 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||||| || |||| || |||||||| |||||||| || || |||||||| Sbjct 27602262 GGATACAATAGAGAACGTAAAGGCTAAGATTCAAGACAAAGAAGGAATTCCTCCTGATCA 27602203 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | | |||||||| ||||||||| | || ||| | ||||| | |||||| || Sbjct 27602202 ACAACGTTTAATTTTTGCTGGAAAACAACTTGAAGATGGAAGAACACTCTCAGATTACAA 27602143 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||| |||||||| ||| | |||||||| || | | ||||| || || Sbjct 27602142 TATTCAGAAAGAATCTACTCTTCATTTGGTATTGAGACTTCGAGGAGGAAT 27602092 Score = 147 bits (162), Expect = 3e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | || || ||||| || |||||||| ||| | || ||||||| Sbjct 27602550 AATGCAAATTTTTGTCAAAACTCTAACTGGGAAAACTATCACTCTTGAAGTTGAAGCTTC 27602491 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||||| || |||| || |||||||| |||||||| || || |||||||| Sbjct 27602490 AGATACAATAGAAAACGTAAAGGCTAAGATTCAAGACAAAGAAGGAATTCCTCCTGATCA 27602431 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | | || ||||| || ||||||||||| ||| | ||||| | |||||| || Sbjct 27602430 ACAACGTTTAATCTTTGCTGGTAAACAATTAGAAGATGGAAGAACACTCTCAGATTACAA 27602371 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||| |||||||| ||| | ||| |||| || | | ||||| || || Sbjct 27602370 TATTCAGAAAGAATCTACTCTTCATCTGGTATTGAGACTTCGAGGGGGAAT 27602320 Score = 145 bits (160), Expect = 1e-29 Identities = 175/238 (74%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | || || || || || |||||||| ||| | || ||||||| Sbjct 27602777 ATGCAAATTTTTGTTAAAACTCTTACTGGGAAAACTATCACTCTTGAAGTTGAAGCTTCA 27602718 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 |||||||| || ||||| || |||||||| |||||||| || || ||||||||| Sbjct 27602717 GATACAATAGAGAACGTAAAAGCTAAGATTCAAGACAAAGAAGGAATTCCTCCTGATCAA 27602658 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | |||||||| |||||||| | || ||| | ||||| | |||||| ||| Sbjct 27602657 CAACGTTTGATTTTTGCTGGAAAACAGCTTGAAGATGGAAGAACACTCTCAGATTACAAT 27602598 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||| |||||||| ||| | ||| |||| ||| | | ||||| || || ||| || Sbjct 27602597 ATTCAGAAAGAATCTACTCTTCATCTGGTATTAAGACTTCGAGGAGGAATGCAAATTT 27602540 Score = 143 bits (158), Expect = 4e-29 Identities = 175/239 (73%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| | || || || || || |||||||| ||| | || ||||||| Sbjct 27602094 AATGCAGATTTTTGTCAAAACTCTTACTGGGAAAACTATCACTCTTGAAGTTGAAGCTTC 27602035 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||||| || |||| || |||||||| |||||||| || || |||||||| Sbjct 27602034 GGATACAATAGAGAACGTAAAGGCTAAGATTCAAGACAAAGAAGGAATTCCTCCTGATCA 27601975 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | | || ||||| || ||||||||||| ||| | ||||| | |||||| || Sbjct 27601974 ACAACGTTTAATCTTTGCTGGTAAACAATTAGAAGATGGAAGAACACTCTCAGATTACAA 27601915 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 |||||| |||||||| ||| | ||| |||| ||| | | ||||| || || ||| || Sbjct 27601914 TATTCAGAAAGAATCTACTCTTCATCTGGTATTAAGACTTCGAGGAGGAATGCAAATTT 27601856 Score = 141 bits (156), Expect = 1e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | || || || || || |||||||| || | || ||||||| Sbjct 27601638 AATGCAAATCTTTGTTAAAACTCTTACTGGAAAAACTATTACACTTGAAGTTGAAGCTTC 27601579 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| || ||| |||| || ||||||||||||||||| || || |||||||| Sbjct 27601578 GGATACCATAGAAAATGTAAAGGCTAAGATTCAAGATAAAGAAGGAATTCCTCCTGATCA 27601519 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | | |||||||| ||||||||| | || ||| | ||||| | |||||| || Sbjct 27601518 GCAACGATTGATTTTTGCTGGAAAACAACTTGAAGATGGAAGAACACTCTTAGATTACAA 27601459 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTT 124750 |||||| |||||||| || ||||| ||||| || Sbjct 27601458 TATTCAGAAAGAATCTACATTGCACTTGGTATT 27601426 Score = 141 bits (156), Expect = 1e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| | ||||| ||||||| ||||| || || |||| ||||||| Sbjct 27605434 AATGCAGATCTTTGTTAAGACTTTAACAGGAAAAACCATCACCTTAGAAGTTGAAGCTTC 27605375 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || ||||| ||| |||| || ||||||||||||||||| || ||||| ||||| Sbjct 27605374 AGACACAATAGAGAATGTAAAGGCTAAGATTCAAGATAAAGAAGGAATTCCACCAGATCA 27605315 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | | |||||||| || |||||| | || ||| || ||||| | ||||||||| Sbjct 27605314 ACAACGTTTAATTTTTGCTGGCAAACAACTTGAAGATGGTAGAACACTTTCAGATTATAA 27605255 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||| ||||| ||||| || | ||||| || || | | |||| ||||| Sbjct 27605254 TATCCAAAAGGAATCTACACTTCATTTAGTGTTGAGACTTAGAGGAGGTAT 27605204 Score = 127 bits (140), Expect = 3e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | || || || || || ||||| || || |||| ||||||| Sbjct 27604749 ATGCAAATCTTTGTCAAAACTCTCACTGGTAAAACCATTACCTTAGAAGTTGAAGCTTCA 27604690 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 |||||||| ||| | ||| || |||||||| |||||||| || || ||||||||| Sbjct 27604689 GATACAATAGAGAATGTTAAAGCTAAGATTCAAGACAAAGAAGGAATTCCTCCTGATCAA 27604630 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | || ||||| || ||||||||||| ||| | |||| | ||||||||| Sbjct 27604629 CAACGTTTAATCTTTGCTGGTAAACAATTAGAAGATGGAAGAACTCTTTCAGATTATAAC 27604570 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| |||||||| || | || || || || | | ||||| || || Sbjct 27604569 ATTCAGAAAGAATCCACACTTCACTTAGTGTTGAGACTTCGAGGGGGAAT 27604520 Score = 127 bits (140), Expect = 3e-24 Identities = 171/238 (72%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | || || || || ||||| || || || |||| ||||||| Sbjct 27605205 ATGCAAATCTTTGTCAAAACTCTCACTGGCAAGACAATTACCTTAGAAGTTGAAGCTTCA 27605146 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || ||||| ||| | ||| || ||||||||||||||||| || || |||||||| Sbjct 27605145 GACACAATAGAGAATGTTAAAGCTAAGATTCAAGATAAAGAAGGAATTCCTCCTGATCAG 27605086 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | || ||||| || ||||| | || ||| | ||||| | |||||||||| Sbjct 27605085 CAACGATTGATCTTTGCTGGCAAACAGCTTGAAGATGGAAGAACACTCTCAGATTATAAT 27605026 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||| |||||||| ||| | ||| |||| || | | ||||| || || ||| || Sbjct 27605025 ATTCAGAAAGAATCTACTCTTCATCTGGTATTGAGACTTCGAGGAGGAATGCAAATTT 27604968 Score = 120 bits (132), Expect = 5e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | || || || || || |||||||| || | || ||||||| Sbjct 27604978 AATGCAAATTTTTGTCAAAACTCTTACTGGAAAAACTATCACACTTGAAGTTGAAGCTTC 27604919 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || ||||| ||| |||| || |||||||| |||||||| || || |||||||| Sbjct 27604918 AGACACAATAGAAAATGTAAAGGCTAAGATTCAAGACAAAGAAGGAATTCCCCCTGATCA 27604859 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | | || ||||| || |||||| |||| ||| | |||| | ||||||||| Sbjct 27604858 GCAACGCTTGATCTTTGCTGGTAAACAACTAGAAGATGGAAGAACTCTCTCAGATTATAA 27604799 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||| ||||| ||||| || | ||||| || || | | |||| ||||| Sbjct 27604798 TATCCAAAAGGAATCTACACTCCATTTAGTGTTGAGACTTAGAGGAGGTAT 27604748 >seq4 Length=12718334 Score = 145 bits (160), Expect = 1e-29 Identities = 148/193 (77%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 124536 ACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCA 124595 || ||||| |||||| | || || | || || |||||||| ||| | || | |||||| Sbjct 12038675 ACGATGCAGATATTTGTGAAAACTTTGACGGGTAAAACTATCACTCTTGAAGTAGAAGCA 12038616 Query 124596 AATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655 ||||| || ||| | ||| |||||||| ||||||||||| |||||||||||| Sbjct 12038615 TCAGATACTATAGAAAATGTGAAAGCTAAAATTCAGGATAAAGAAGGAATACCACCTGAT 12038556 Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715 || ||| | ||||||||||| ||||| ||||| || ||| |||| || ||| || ||| Sbjct 12038555 CAGCAACGTCTTATTTTTGCTGGAAAGCAATTGGAAGATGGTCGTACTTTATCGGACTAT 12038496 Query 124716 AATATTCAAAAAG 124728 ||||||||||||| Sbjct 12038495 AATATTCAAAAAG 12038483 Score = 118 bits (130), Expect = 2e-21 Identities = 107/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 124640 AGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCG 124699 ||| || ||||||| ||||||||| | |||||||| ||||||||||| || ||| || | Sbjct 4835777 AGGAATTCCACCTGGTCAACAAAGATTAATTTTTGCTGGAAAACAATTGGAAGATGGTAG 4835718 Query 124700 AACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACG 124759 ||| | ||||||||||||||| || ||||| || || |||||||| |||||||| | Sbjct 4835717 GACACTTTCAGATTATAATATTCAGAAGGAATCTACATTACATTTGGTGCTACGTTTAAG 4835658 Query 124760 AGGTGGTATTAAAAA 124774 |||||| ||||| Sbjct 4835657 GGGTGGTGCCAAAAA 4835643 Score = 93.3 bits (102), Expect = 6e-14 Identities = 88/110 (80%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 124536 ACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCA 124595 || ||||| |||||| | ||||| ||||| ||||| ||||| ||| | || |||||||| Sbjct 4835942 ACCATGCAGATATTTGTGAAGACTCTAACTGGCAAGACTATTACTCTTGAAGTTGAAGCA 4835883 Query 124596 AATGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTA 124644 ||||| ||| ||| ||||| || |||||||||||||||||||||| Sbjct 4835882 TCAGATACCATTGAAAATGTTAAAGCA-AAAATTCAAGATAAAGAAGGTA 4835834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755405752732800