Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20mellifera_20[refseq_20GCF_5F000002195.4_202011-01-14] 5,321 sequences; 250,287,000 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq6 129 6e-25 seq1 122 9e-23 seq4 100 3e-16 >seq6 Length=18472937 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 |||||||| |||||||| |||||||| | ||| ||||||||||| || |||||||| Sbjct 4826332 CCTCCTCGCAAACGCAATACTAAATGTAGTGTTGATTCTTTTTGAATATTGTAATCCGAA 4826273 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| | ||||| ||||||||||||||| | |||| | |||||||| ||||| Sbjct 4826272 AGTGTACGACCATCTTCCAGTTGTTTACCAGCAAAAATCAATCTCTGCTGATCTGGAGGG 4826213 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGC-TGTTCCACCGTGTCCGTGGGTTCTAC 143136 || || || || || | | |||| |||||| | | ||| | || || | | ||| || Sbjct 4826212 ATACCCTCCTTATC-TTGAATTTTAGTTTTAACATTTTCAATAGTATCGGATGCTTCAAC 4826154 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | || || ||||| | ||||| ||||| |||||||| Sbjct 4826153 CTCCAAAGTGATGGTTTTTCCGGTAAGAGTTTTGACGAAAATTTGCAT 4826106 Score = 123 bits (136), Expect = 3e-23 Identities = 154/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 142975 AACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTC 143034 ||| | ||||| ||||||||||||||| || ||||||||| | || | ||||| Sbjct 4825859 AACGAGATGAAGTGTAGATTCTTTTTGAATATTGTAATCGGAAAGAGTACGACCATCTTC 4825800 Query 143035 GAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 143094 | |||||| |||||| |||||| | ||| || || ||||| || ||||||||||| Sbjct 4825799 TAATTGTTTTCCAGCAAAGATCAATCTTTGTTGGTCAGGAGGAATACCTTCTTTGTCTTG 4825740 Query 143095 AATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTT 143154 ||| || ||||| | ||| | || || | | ||||||||||| ||| | ||||| Sbjct 4825739 AATCTTAGCTTTTACATTTTCAATAGTATCAGAAGCTTCTACTTCAAGAGTAATAGTCTT 4825680 Query 143155 GCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || || | ||||| ||||| ||||||||| Sbjct 4825679 TCCTGTAAGGGTTTTGACGAAAATTTGCATA 4825649 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| |||||| | |||||||| | ||| || |||||||| || || ||||| Sbjct 4824736 CCACCTCTTAAACGTAGTACTAAATGTAGTGTTGACTCTTTTTGAATATTATAATCAGAT 4824677 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| | | ||||| | ||||||||||||| |||||| | ||||||||| || || Sbjct 4824676 AATGTACGCCCATCTTCTAATTGTTTACCAGCAAAGATCAATCTTTGCTGATCTGGTGGA 4824617 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| ||||| |||||| ||||| | ||| | || || | || || || Sbjct 4824616 ATTCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATGGTATCTGAGGCCTCAACC 4824557 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | || || || ||||||||||| || || || ||||| Sbjct 4824556 TCCAGAGTTATTGTTTTACCTGTCAATGTTTTGACAAAGATCTGCAT 4824510 Score = 122 bits (134), Expect = 9e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 |||||||| | ||||| |||||| |||||||| || ||||||||| | || | Sbjct 4826548 CGCAAAACAAGATGAAGTGTAGACTCTTTTTGAATATTGTAATCGGAAAGAGTACGACCA 4826489 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 || || ||||||||||||||| |||| | | || ||||| || || || ||||||||| Sbjct 4826488 TCCTCCAGTTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGGGGAATACCTTCTTTG 4826429 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || |||||| ||| | | ||| | || || | | ||||||||||| ||| | Sbjct 4826428 TCTTGAATTTTGGCTTTCACATTTTCAATGGTATCGGAAGCTTCTACTTCAAGAGTAATA 4826369 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||||| || || | ||||| ||||| |||||||| Sbjct 4826368 GTCTTTCCTGTAAGAGTTTTGACGAAAATTTGCAT 4826334 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 |||||||| | ||||| |||||| |||||||| || ||||||||| | || | Sbjct 4825408 CGCAAAACAAGATGAAGTGTAGACTCTTTTTGAATATTGTAATCGGAAAGAGTACGACCA 4825349 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 ||||| | |||||| |||||| |||||| | || || || ||||| || ||||||||| Sbjct 4825348 TCTTCTAATTGTTTTCCAGCAAAGATCAATCTCTGTTGGTCAGGAGGAATACCTTCTTTG 4825289 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || ||| || ||||| | ||| | || || | | ||||||||||| ||| | Sbjct 4825288 TCTTGAATCTTAGCTTTTACATTTTCAATGGTATCAGAAGCTTCTACTTCAAGAGTAATA 4825229 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || || || || | ||||| ||||| ||||||||| Sbjct 4825228 GTTTTTCCTGTAAGGGTTTTGACGAAAATTTGCATA 4825193 Score = 113 bits (124), Expect = 5e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 |||||||| | ||||| ||||||||||||||| || ||||||||| | || | Sbjct 4824952 CGCAAAACAAGATGAAGTGTAGATTCTTTTTGAATATTGTAATCGGAAAGAGTACGACCA 4824893 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 ||||| || |||||||| ||| |||||| | || ||||| ||||| || |||||||| Sbjct 4824892 TCTTCCAGCTGTTTACCGGCAAAGATCAATCTCTGTTGATCAGGAGGAATACCTTCTTTA 4824833 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || |||||| ||| | | ||| | || || | | ||| ||||| | ||| | Sbjct 4824832 TCCTGAATTTTAGCTTTAACATTTTCAATAGTATCTGAAGCTTCAACTTCTAAAGTAATA 4824773 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || || || || | |||||| || || |||||||| Sbjct 4824772 GTTTTTCCAGTGAGTGTTTTGACAAAAATTTGCAT 4824738 Score = 113 bits (124), Expect = 5e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 |||||||| | ||||| ||||||||||||||| || ||||||||| | || | Sbjct 4825180 CGCAAAACAAGATGAAGTGTAGATTCTTTTTGAATATTGTAATCGGAAAGAGTACGACCA 4825121 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 ||||| ||||||||||| ||| |||| | | || ||||| ||||| || |||||||| Sbjct 4825120 TCTTCCAGTTGTTTACCGGCAAAGATTAATCTCTGTTGATCAGGAGGAATACCTTCTTTA 4825061 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || |||||| ||| | | ||| | || || | | ||| ||||| | ||| | Sbjct 4825060 TCCTGAATTTTGGCTTTAACATTTTCAATAGTATCTGAAGCTTCAACTTCTAAAGTAATA 4825001 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || || || || | |||||| || || |||||||| Sbjct 4825000 GTTTTTCCAGTGAGTGTTTTGACAAAAATTTGCAT 4824966 Score = 109 bits (120), Expect = 6e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| |||||||| |||||||| | ||| ||||||||||| || || ||||| Sbjct 4826104 CCACCTCTCAAACGCAATACTAAATGTAATGTTGATTCTTTTTGAATATTATAATCCGAA 4826045 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| | ||||| || |||||||||||| | |||| | |||||||| ||||| Sbjct 4826044 AGTGTACGACCATCTTCCAGCTGTTTACCAGCAAAAATCAATCTCTGCTGATCTGGAGGA 4825985 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGC-TGTTCCACCGTGTCCGTGGGTTCTAC 143136 || || || || || | | |||| |||||| | | ||| | || || | | ||| || Sbjct 4825984 ATACCCTCCTTATC-TTGAATTTTAGTTTTAACATTTTCGATAGTATCGGATGCTTCAAC 4825926 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | ||| | || || ||||| | || || ||||| ||||||||| Sbjct 4825925 CTCCAAAGTGATGGTTTTTCCGGTAAGAGTCTTAACGAAAATTTGCATA 4825877 Score = 109 bits (120), Expect = 6e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || ||||| | ||| | || | |||| || ||||||||||| || || |||||| Sbjct 4826788 CCACCTCGGAGACGAAGTACAAGGTGAAGAGTCGATTCTTTTTGAATATTATAATCGGAA 4826729 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| | ||||| || |||||||||||| | |||| | || ||||| ||||| Sbjct 4826728 AGTGTACGACCATCTTCCAGCTGTTTACCAGCAAAAATCAATCTCTGTTGATCAGGAGGA 4826669 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||||||||| ||||||| ||||| | ||| | ||||| | | ||| ||| Sbjct 4826668 ATACCTTCTTTGTCTTGAATTTTTGCTTTTACATTTTCAATTGTGTCAGAAGCTTCAACT 4826609 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 |||| ||| | || || || || | || || || || ||||||||| Sbjct 4826608 TCAAGAGTAATAGTTTTACCCGTGAGAGTCTTGACAAAAATTTGCATA 4826561 Score = 102 bits (112), Expect = 8e-17 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 142975 AACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTC 143034 ||| | ||||| || ||||||||||| || || |||||| | || | ||||| Sbjct 4825631 AACGAGATGAAGGGTCGATTCTTTTTGAATATTATAATCGGAAAGAGTACGACCATCTTC 4825572 Query 143035 GAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 143094 ||||||||||| ||| |||||| | || ||||| ||||| || |||||||| || Sbjct 4825571 CAGTTGTTTACCGGCAAAGATCAATCTCTGTTGATCTGGAGGAATACCTTCTTTATCCTG 4825512 Query 143095 AATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTT 143154 |||||| ||| | | ||| | || || | | ||| ||||| | ||| | ||||| Sbjct 4825511 AATTTTGGCTTTAACATTTTCAATGGTATCTGAAGCTTCAACTTCGAGAGTAATAGTCTT 4825452 Query 143155 GCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || || | ||||| ||||| ||||||||| Sbjct 4825451 TCCTGTAAGGGTTTTGACGAAAATTTGCATA 4825421 >seq1 Length=29893408 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||| || | | ||| || | ||||| ||||||||||| || || |||||||| Sbjct 27601639 CCTCCACGAAGTCTCAATACCAGATGAAGAGTAGATTCTTTCTGAATATTGTAATCTGAG 27601698 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| || ||||| || ||||| |||||| |||||| ||||||||||| ||||| Sbjct 27601699 AGTGTTCTTCCATCTTCAAGCTGTTTTCCAGCAAAGATCAATCGTTGCTGATCAGGAGGA 27601758 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||||||||| ||| || ||||| | ||| | || || | | ||| ||| Sbjct 27601759 ATTCCTTCTTTGTCTTGAATCTTAGCTTTTACGTTTTCTATTGTATCTGAAGCTTCAACT 27601818 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| ||| | || || || || | ||||| || || |||||||| Sbjct 27601819 TCAAGAGTGATAGTTTTCCCAGTTAGAGTTTTGACAAAAATTTGCAT 27601865 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||||| | | ||| |||||||| | ||||||||| ||||| || || ||||| Sbjct 27604751 CCTCCTCTAAGTCTCAACACTAAATGGAGTGTAGATTCCTTTTGGATATTATAATCTGAG 27604810 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || || ||||| ||||||||||||||| |||||| ||||||||||| || || Sbjct 27604811 AGAGTTCTTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAGCGTTGCTGATCAGGGGGA 27604870 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||||||||| ||| || |||| | ||| | ||||| | | ||| ||| Sbjct 27604871 ATTCCTTCTTTGTCTTGAATCTTAGCCTTTACATTTTCTATTGTGTCTGAAGCTTCAACT 27604930 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| || | || || || || | ||||| || || |||||||| Sbjct 27604931 TCAAGTGTGATAGTTTTTCCAGTAAGAGTTTTGACAAAAATTTGCAT 27604977 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 |||||||| | | ||| || || || | |||||||||||| || || |||||||| Sbjct 27601411 CCTCCTCGAAGTCTCAATACCAAGTGCAATGTAGATTCTTTCTGAATATTGTAATCTAAG 27601470 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| || ||||| |||||||| |||||| | |||| ||||||||||| ||||| Sbjct 27601471 AGTGTTCTTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCGTTGCTGATCAGGAGGA 27601530 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || |||||||| || ||| || |||| | ||| | || |||| | ||| ||| Sbjct 27601531 ATTCCTTCTTTATCTTGAATCTTAGCCTTTACATTTTCTATGGTATCCGAAGCTTCAACT 27601590 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| || | || || || || | ||||| || || |||||||| Sbjct 27601591 TCAAGTGTAATAGTTTTTCCAGTAAGAGTTTTAACAAAGATTTGCAT 27601637 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 |||||||| | | ||| || ||||||| ||||||||||| || || |||||||| Sbjct 27602095 CCTCCTCGAAGTCTCAATACCAAATGAAGAGTAGATTCTTTCTGAATATTGTAATCTGAG 27602154 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| || ||||| |||||||| |||||| | || | |||||| ||||| ||||| Sbjct 27602155 AGTGTTCTTCCATCTTCAAGTTGTTTTCCAGCAAAAATTAAACGTTGTTGATCAGGAGGA 27602214 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||||||||| ||| || |||| | || | || |||| | ||| || Sbjct 27602215 ATTCCTTCTTTGTCTTGAATCTTAGCCTTTACGTTCTCTATTGTATCCGAAGCTTCAACC 27602274 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| ||| | || || || || | ||||| || || |||||||| Sbjct 27602275 TCAAGAGTGATAGTTTTTCCAGTTAGAGTTTTGACAAAGATTTGCAT 27602321 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || ||||| | | ||| || | ||||| ||||||||||| || || |||||||| Sbjct 27602323 CCCCCTCGAAGTCTCAATACCAGATGAAGAGTAGATTCTTTCTGAATATTGTAATCTGAG 27602382 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| || ||||| | ||||||||||||| |||| | |||||| ||||| ||||| Sbjct 27602383 AGTGTTCTTCCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGAGGA 27602442 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||||||||| ||| || |||| | ||| | || || | | ||| ||| Sbjct 27602443 ATTCCTTCTTTGTCTTGAATCTTAGCCTTTACGTTTTCTATTGTATCTGAAGCTTCAACT 27602502 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| ||| | || || || || | ||||| || || |||||||| Sbjct 27602503 TCAAGAGTGATAGTTTTCCCAGTTAGAGTTTTGACAAAAATTTGCAT 27602549 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 |||||||| | | ||| || | ||||| ||||||||||| || || || ||||| Sbjct 27604979 CCTCCTCGAAGTCTCAATACCAGATGAAGAGTAGATTCTTTCTGAATATTATAATCTGAG 27605038 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| || ||||| || ||||| |||||| |||||| ||||||||||| ||||| Sbjct 27605039 AGTGTTCTTCCATCTTCAAGCTGTTTGCCAGCAAAGATCAATCGTTGCTGATCAGGAGGA 27605098 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || |||||||| || ||| || ||| | | || | ||||| | | ||| ||| Sbjct 27605099 ATTCCTTCTTTATCTTGAATCTTAGCTTTAACATTCTCTATTGTGTCTGAAGCTTCAACT 27605158 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 143188 || | || | |||||||| || | ||||| || || ||||||||| || Sbjct 27605159 TCTAAGGTAATTGTCTTGCCAGTGAGAGTTTTGACAAAGATTTGCATACCT 27605209 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 |||||||| | | || || | ||||| ||||||||||| || || |||||||| Sbjct 27601867 CCTCCTCGAAGTCTTAATACCAGATGAAGAGTAGATTCTTTCTGAATATTGTAATCTGAG 27601926 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| || ||||| | ||||||||||||| |||| | |||||| ||||| ||||| Sbjct 27601927 AGTGTTCTTCCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGAGGA 27601986 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||||||||| ||| || |||| | || | || |||| | ||| ||| Sbjct 27601987 ATTCCTTCTTTGTCTTGAATCTTAGCCTTTACGTTCTCTATTGTATCCGAAGCTTCAACT 27602046 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| ||| | || || || || | ||||| || || || ||||| Sbjct 27602047 TCAAGAGTGATAGTTTTCCCAGTAAGAGTTTTGACAAAAATCTGCAT 27602093 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 |||||||| | | || || | ||||| ||||||||||| || || |||||||| Sbjct 27602551 CCTCCTCGAAGTCTTAATACCAGATGAAGAGTAGATTCTTTCTGAATATTGTAATCTGAG 27602610 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| || ||||| || ||||| |||||| | |||| |||||| ||||| ||||| Sbjct 27602611 AGTGTTCTTCCATCTTCAAGCTGTTTTCCAGCAAAAATCAAACGTTGTTGATCAGGAGGA 27602670 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||||||||| ||| || ||||| | || | || || | | ||| ||| Sbjct 27602671 ATTCCTTCTTTGTCTTGAATCTTAGCTTTTACGTTCTCTATTGTATCTGAAGCTTCAACT 27602730 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| ||| | || || || || | ||||| || || |||||||| Sbjct 27602731 TCAAGAGTGATAGTTTTCCCAGTAAGAGTTTTAACAAAAATTTGCAT 27602777 Score = 105 bits (116), Expect = 7e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || ||||| | | ||| ||||| |||| ||| |||||||| || ||||| ||||| Sbjct 27604523 CCCCCTCGAAGTCTCAACACTAAGTGAAGTGTGGATTCTTTCTGAATGTTATAATCTGAA 27604582 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || || ||||| | ||||||||||||| |||| | |||||| ||||| ||||| Sbjct 27604583 AGAGTTCTTCCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGAGGA 27604642 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||||||||| ||| || ||| | | || | || || | | ||| ||| Sbjct 27604643 ATTCCTTCTTTGTCTTGAATCTTAGCTTTAACATTCTCTATTGTATCTGAAGCTTCAACT 27604702 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 143188 || | || | || || || || | ||||| || || ||||||||| || Sbjct 27604703 TCTAAGGTAATGGTTTTACCAGTGAGAGTTTTGACAAAGATTTGCATACCT 27604753 >seq4 Length=12718334 Score = 100 bits (110), Expect = 3e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 ||||| | ||| || |||||| | || |||||||||||||| || ||||| |||||||| Sbjct 12038518 TCTTCCAATTGCTTTCCAGCAAAAATAAGACGTTGCTGATCAGGTGGTATTCCTTCTTTA 12038577 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || |||||| ||| | | ||| | || || | | ||||||||||| ||| | Sbjct 12038578 TCCTGAATTTTAGCTTTCACATTTTCTATAGTATCTGATGCTTCTACTTCAAGAGTGATA 12038637 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || || || ||||| ||||| || ||||| ||||| Sbjct 12038638 GTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 12038672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506980677204720