Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20mellifera_20[refseq_20GCF_5F000002195.4_202011-01-14] 5,321 sequences; 250,287,000 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq7 89.7 8e-13 >seq7 Length=13219345 Score = 89.7 bits (98), Expect = 8e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 193881 GCAAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCT 193940 ||||| || ||| ||| |||||| | | |||||| | || ||||| | ||| Sbjct 12506418 GCAAAATTATATAGTTTTTGGATTGTAATAAATTATAGAGAAGCATATAATATGTTTGCT 12506359 Query 193941 AGTTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGT 194000 || ||||||| | || ||||| || ||| | ||||| |||| ||||| || | Sbjct 12506358 TGTAATGGTATTTTATTTAATCATGAGAGTCCTCGTAGAGGAGAGAATTTTGTTACAAGA 12506299 Query 194001 AAGATTACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTATCTTGGT 194060 || | || | | || | ||||| | |||| ||||| | |||||| | | || Sbjct 12506298 AAAGTGACCAGATCTATAGCAAAGATACATCTTGGTTTACAAGACATTCTTGAATTAGGA 12506239 Query 194061 AATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAG 194109 ||| | ||||||| | ||||||||||||||||| ||||||||||||| Sbjct 12506238 AATTTAGATGCTAAACGAGATTGGGGACACGCAAAAGATTATGTTGAAG 12506190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807501487484760