Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20mellifera_20[refseq_20GCF_5F000002195.4_202011-01-14] 5,321 sequences; 250,287,000 total letters Query= NC_007924.1 Length=38239 Score E Sequences producing significant alignments: (Bits) Value seq3316 80.6 7e-11 >seq3316 Length=958 Score = 80.6 bits (88), Expect = 7e-11 Identities = 109/151 (72%), Gaps = 1/151 (1%) Strand=Plus/Plus Query 15738 TATTCGTGGTATGACAAGCTATGGGGCATATGTAAATGAAGCTAGTTTAGCTACACATGA 15797 |||||||||||||||| |||||| || || | |||||||| | |||| || || Sbjct 165 TATTCGTGGTATGACAGCCTATGGTGCTTACATCAATGAAGCGTCACTTGCTAATCAAGA 224 Query 15798 TGTATTTCAAGAAATTTTGCAACGTTGCTCTATTGAAGGCGCACGCATTATTTGCGATAC 15857 |||||| | ||||| | ||||| ||| | | | ||| | |||||||||||||| Sbjct 225 AGTATTTGATGAAATACAAAAGCGTTGTTCTGGTAAGGACGCTAGAATTATTTGCGATAC 284 Query 15858 AAACCCAGATATACCGACGCATTGGCTTAAA 15888 ||||| || |||| || |||| |||||| Sbjct 285 CAACCCGGACGTACCAACACATT-TCTTAAA 314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122235475834202