Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20mellifera_20[refseq_20GCF_5F000002195.4_202011-01-14] 5,321 sequences; 250,287,000 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq6 159 8e-34 seq4 159 8e-34 seq1 152 1e-31 >seq6 Length=18472937 Score = 159 bits (176), Expect = 8e-34 Identities = 174/230 (76%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| |||| || |||||||||| || ||||||||| |||||||| |||| Sbjct 4825648 CCACCGCGAAGTCGTAGAACGAGATGAAGGGTCGATTCTTTTTGAATATTATAATCGGAA 4825589 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| | |||||| || || ||||||| | ||||||| ||||| Sbjct 4825588 AGAGTACGACCATCTTCCAGTTGTTTACCGGCAAAGATCAATCTCTGTTGA---TCTGGA 4825532 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || |||||||||||||| ||||| ||||| || ||||| || | ||| | ||| Sbjct 4825531 GGAATACCTTCTTTATCCTGAATTTTGGCTTTAACATTTTCAATGGTATCTGAAGCTTCA 4825472 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| || || ||||| || || || || |||||||| || ||||| Sbjct 4825471 ACTTCGAGAGTAATAGTCTTTCCTGTAAGGGTTTTGACGAAAATTTGCAT 4825422 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || |||| || |||||||||| || ||||||||| ||||| || |||| Sbjct 4825876 CCACCACGAAGTCGTAGAACGAGATGAAGTGTAGATTCTTTTTGAATATTGTAATCGGAA 4825817 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||||||||||||||| || ||||||| | ||||| | || Sbjct 4825816 AGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAGATCAATCTTTGTTGGTCAGGAGGA 4825757 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || |||||||| || || || || ||||| || ||||| |||| ||| | ||||||| Sbjct 4825756 ATACCTTCTTTGTCTTGAATCTTAGCTTTTACATTTTCAATAGTATCAGAAGCTTCTACT 4825697 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| || || || || |||||||| || ||||| Sbjct 4825696 TCAAGAGTAATAGTCTTTCCTGTAAGGGTTTTGACGAAAATTTGCAT 4825650 Score = 132 bits (146), Expect = 1e-25 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| |||| | || ||||||| || ||||||||| ||||| || |||| Sbjct 4825192 CCACCGCGAAGTCGCAAAACAAGATGAAGTGTAGATTCTTTTTGAATATTGTAATCGGAA 4825133 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| | |||||| || || ||||| | | ||||||| | || Sbjct 4825132 AGAGTACGACCATCTTCCAGTTGTTTACCGGCAAAGATTAATCTCTGTTGATCAGGAGGA 4825073 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || |||||||||||||| ||||| ||||| || ||||| |||| ||| | ||| ||| Sbjct 4825072 ATACCTTCTTTATCCTGAATTTTGGCTTTAACATTTTCAATAGTATCTGAAGCTTCAACT 4825013 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || | || || || || || || || || ||||| || || |||||| Sbjct 4825012 TCTAAAGTAATAGTTTTTCCAGTGAGTGTTTTGACAAAAATTTGCATT 4824965 Score = 131 bits (144), Expect = 4e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || |||| | || ||||||| || |||||||| ||||| || |||| Sbjct 4825420 CCACCACGAAGTCGCAAAACAAGATGAAGTGTAGACTCTTTTTGAATATTGTAATCGGAA 4825361 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||||||||||||||| || ||||||| | |||||| | || Sbjct 4825360 AGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAGATCAATCTCTGTTGGTCAGGAGGA 4825301 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || |||||||| || || || || ||||| || ||||| || | ||| | ||||||| Sbjct 4825300 ATACCTTCTTTGTCTTGAATCTTAGCTTTTACATTTTCAATGGTATCAGAAGCTTCTACT 4825241 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || || || || || || |||||||| || ||||| Sbjct 4825240 TCAAGAGTAATAGTTTTTCCTGTAAGGGTTTTGACGAAAATTTGCAT 4825194 Score = 131 bits (144), Expect = 4e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | |||||| || |||| || ||||||||| |||||||| |||| Sbjct 4826788 CCACCTCGGAGACGAAGTACAAGGTGAAGAGTCGATTCTTTTTGAATATTATAATCGGAA 4826729 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| | ||||| || || || |||| | ||||||| | || Sbjct 4826728 AGTGTACGACCATCTTCCAGCTGTTTACCAGCAAAAATCAATCTCTGTTGATCAGGAGGA 4826669 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || |||||||| || || ||||| ||||| || ||||| || | || | ||| ||| Sbjct 4826668 ATACCTTCTTTGTCTTGAATTTTTGCTTTTACATTTTCAATTGTGTCAGAAGCTTCAACT 4826609 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || || || || ||||||||||| || || ||||| Sbjct 4826608 TCAAGAGTAATAGTTTTACCCGTGAGAGTCTTGACAAAAATTTGCAT 4826562 Score = 129 bits (142), Expect = 1e-24 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || |||| | || ||||||| || ||||||||| ||||| || |||| Sbjct 4824965 TCCACCACGAAGTCGCAAAACAAGATGAAGTGTAGATTCTTTTTGAATATTGTAATCGGA 4824906 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || || || ||||| | ||||| || || ||||||| | ||||||| | || Sbjct 4824905 AAGAGTACGACCATCTTCCAGCTGTTTACCGGCAAAGATCAATCTCTGTTGATCAGGAGG 4824846 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || |||||||||||||| ||||| ||||| || ||||| |||| ||| | ||| || Sbjct 4824845 AATACCTTCTTTATCCTGAATTTTAGCTTTAACATTTTCAATAGTATCTGAAGCTTCAAC 4824786 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||| | || || || || || || || || ||||| || || |||||| Sbjct 4824785 TTCTAAAGTAATAGTTTTTCCAGTGAGTGTTTTGACAAAAATTTGCATT 4824737 Score = 107 bits (118), Expect = 5e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 |||||||| |||||||| || | | || || || |||||||||||||| || || ||| Sbjct 4824700 TCTTTTTGAATATTATAATCAGATAATGTACGCCCATCTTCTAATTGTTTACCAGCAAAG 4824641 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | || ||| ||| |||||||| || || || ||||||||||| || ||| Sbjct 4824640 ATCAATCTTTGCTGATCTGGTGGAATTCCTTCCTTGTCTTGAATTTTCGCTTTTACATTT 4824581 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| | || || || || || || || || || |||| || ||||| Sbjct 4824580 TCAATGGTATCTGAGGCCTCAACCTCCAGAGTTATTGTTTTACCTGTCAATGTTTTGACA 4824521 Query 288463 AATATCTGCATTAT 288476 || |||||||| || Sbjct 4824520 AAGATCTGCATGAT 4824507 >seq4 Length=12718334 Score = 159 bits (176), Expect = 8e-34 Identities = 154/198 (78%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343 ||||||| ||||||||||| | | || || || ||||| ||||| ||||| || || | Sbjct 12038483 CTTTTTGAATATTATAGTCCGATAAAGTACGACCATCTTCCAATTGCTTTCCAGCAAAAA 12038542 Query 288344 TCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTT 288403 | ||||| || ||| | ||| ||||||||||||||||| ||||| |||||||| |||| Sbjct 12038543 TAAGACGTTGCTGATCAGGTGGTATTCCTTCTTTATCCTGAATTTTAGCTTTCACATTTT 12038602 Query 288404 CTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 |||||| ||| | ||||||||| || ||||| || || || |||| ||| || || | Sbjct 12038603 CTATAGTATCTGATGCTTCTACTTCAAGAGTGATAGTTTTACCCGTCAAAGTTTTCACAA 12038662 Query 288464 ATATCTGCATTATGTTAT 288481 |||||||||| || ||| Sbjct 12038663 ATATCTGCATCGTGGTAT 12038680 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 ||||||||||| || ||||| ||||| || ||||| || | ||| | ||| ||||| Sbjct 4835836 CCTTCTTTATCTTGAATTTTTGCTTTAACATTTTCAATGGTATCTGATGCTTCAACTTCA 4835895 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| || || |||||||| || ||||||||||| Sbjct 4835896 AGAGTAATAGTCTTGCCAGTTAGAGTCTTCACAAATATCTGCAT 4835939 >seq1 Length=29893408 Score = 152 bits (168), Expect = 1e-31 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || || ||||| | ||| ||||||| || |||||| || ||||| || || | Sbjct 27601866 TCCTCCTCGAAGTCTTAATACCAGATGAAGAGTAGATTCTTTCTGAATATTGTAATCTGA 27601925 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || | ||| |||||||||||||| || || ||||| | ||| |||||| | || Sbjct 27601926 GAGTGTTCTTCCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGAGG 27601985 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||||||||||| || || || || || || ||||| ||||| | ||| | ||| || Sbjct 27601986 AATTCCTTCTTTGTCTTGAATCTTAGCCTTTACGTTCTCTATTGTATCCGAAGCTTCAAC 27602045 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||| || ||||| || ||||| || ||||| ||||| || ||||||||| Sbjct 27602046 TTCAAGAGTGATAGTTTTCCCAGTAAGAGTTTTGACAAAAATCTGCATT 27602094 Score = 152 bits (168), Expect = 1e-31 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || || ||||| | ||| ||||||| || |||||| || ||||| || || | Sbjct 27602322 TCCCCCTCGAAGTCTCAATACCAGATGAAGAGTAGATTCTTTCTGAATATTGTAATCTGA 27602381 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || | ||| |||||||||||||| || || ||||| | ||| |||||| | || Sbjct 27602382 GAGTGTTCTTCCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGAGG 27602441 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||||||||||| || || || || || || ||||||||||| | ||| | ||| || Sbjct 27602442 AATTCCTTCTTTGTCTTGAATCTTAGCCTTTACGTTTTCTATTGTATCTGAAGCTTCAAC 27602501 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||| || ||||| || ||||| || ||||| ||||| || || |||||| Sbjct 27602502 TTCAAGAGTGATAGTTTTCCCAGTTAGAGTTTTGACAAAAATTTGCATT 27602550 Score = 143 bits (158), Expect = 6e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || || ||||| | ||| ||||||| || |||||| || ||||| || || | Sbjct 27601638 TCCTCCACGAAGTCTCAATACCAGATGAAGAGTAGATTCTTTCTGAATATTGTAATCTGA 27601697 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || | ||| ||||| | |||||||| || ||||||| || || ||| | || Sbjct 27601698 GAGTGTTCTTCCATCTTCAAGCTGTTTTCCAGCAAAGATCAATCGTTGCTGATCAGGAGG 27601757 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||||||||||| || || || || ||||| ||||||||||| | ||| | ||| || Sbjct 27601758 AATTCCTTCTTTGTCTTGAATCTTAGCTTTTACGTTTTCTATTGTATCTGAAGCTTCAAC 27601817 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||| || ||||| || ||||| || ||||| ||||| || || |||||| Sbjct 27601818 TTCAAGAGTGATAGTTTTCCCAGTTAGAGTTTTGACAAAAATTTGCATT 27601866 Score = 138 bits (152), Expect = 3e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || || ||||| | ||| ||||||| || |||||| || ||||| || || | Sbjct 27602550 TCCTCCTCGAAGTCTTAATACCAGATGAAGAGTAGATTCTTTCTGAATATTGTAATCTGA 27602609 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || | ||| ||||| | |||||||| || || |||| ||| |||||| | || Sbjct 27602610 GAGTGTTCTTCCATCTTCAAGCTGTTTTCCAGCAAAAATCAAACGTTGTTGATCAGGAGG 27602669 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||||||||||| || || || || ||||| ||||| ||||| | ||| | ||| || Sbjct 27602670 AATTCCTTCTTTGTCTTGAATCTTAGCTTTTACGTTCTCTATTGTATCTGAAGCTTCAAC 27602729 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTAT 288476 ||| || ||||| || ||||| || ||||| || || || || ||||| || Sbjct 27602730 TTCAAGAGTGATAGTTTTCCCAGTAAGAGTTTTAACAAAAATTTGCATGAT 27602780 Score = 127 bits (140), Expect = 5e-24 Identities = 175/242 (72%), Gaps = 2/242 (1%) Strand=Plus/Plus Query 288232 ATGATTCATACATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGG 288291 |||||| |||||| ||| || || ||||| | || | |||| ||| |||||| || Sbjct 27604510 ATGATT-ATACAT-TCCCCCTCGAAGTCTCAACACTAAGTGAAGTGTGGATTCTTTCTGA 27604567 Query 288292 ATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGC 288351 || ||||| || | || || | ||| |||||||||||||| || || ||||| | ||| Sbjct 27604568 ATGTTATAATCTGAAAGAGTTCTTCCATCTTCTAATTGTTTACCAGCAAAGATTAAACGT 27604627 Query 288352 TGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAA 288411 |||||| | || ||||||||||| || || || || ||||| || || ||||| | | Sbjct 27604628 TGTTGATCAGGAGGAATTCCTTCTTTGTCTTGAATCTTAGCTTTAACATTCTCTATTGTA 27604687 Query 288412 TCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGC 288471 || | ||| ||||| | || || || || || || ||||| ||||| || || ||| Sbjct 27604688 TCTGAAGCTTCAACTTCTAAGGTAATGGTTTTACCAGTGAGAGTTTTGACAAAGATTTGC 27604747 Query 288472 AT 288473 || Sbjct 27604748 AT 27604749 Score = 125 bits (138), Expect = 2e-23 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || || ||||| | ||| | ||||| || |||||| || ||||| || || | Sbjct 27602094 TCCTCCTCGAAGTCTCAATACCAAATGAAGAGTAGATTCTTTCTGAATATTGTAATCTGA 27602153 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || | ||| ||||| | ||||||||| || || || | ||| |||||| | || Sbjct 27602154 GAGTGTTCTTCCATCTTCAAGTTGTTTTCCAGCAAAAATTAAACGTTGTTGATCAGGAGG 27602213 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||||||||||| || || || || || || ||||| ||||| | ||| | ||| || Sbjct 27602214 AATTCCTTCTTTGTCTTGAATCTTAGCCTTTACGTTCTCTATTGTATCCGAAGCTTCAAC 27602273 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || ||||| || || || || ||||| ||||| || || |||||| Sbjct 27602274 CTCAAGAGTGATAGTTTTTCCAGTTAGAGTTTTGACAAAGATTTGCATT 27602322 Score = 123 bits (136), Expect = 6e-23 Identities = 143/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||||||||| || | ||| || | ||| ||||||| |||||| || || || Sbjct 27604786 TTCCTTTTGGATATTATAATCTGAGAGAGTTCTTCCATCTTCTAGTTGTTTACCAGCAAA 27604845 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| || || ||| | || ||||||||||| || || || || || || || || Sbjct 27604846 GATCAAGCGTTGCTGATCAGGGGGAATTCCTTCTTTGTCTTGAATCTTAGCCTTTACATT 27604905 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 |||||| | || | ||| ||||| || ||||| || || || || ||||| ||||| Sbjct 27604906 TTCTATTGTGTCTGAAGCTTCAACTTCAAGTGTGATAGTTTTTCCAGTAAGAGTTTTGAC 27604965 Query 288462 GAATATCTGCATT 288474 || || |||||| Sbjct 27604966 AAAAATTTGCATT 27604978 Score = 123 bits (136), Expect = 6e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || || ||||| | ||| ||||||| || |||||| || |||||||| || | Sbjct 27604978 TCCTCCTCGAAGTCTCAATACCAGATGAAGAGTAGATTCTTTCTGAATATTATAATCTGA 27605037 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || | ||| ||||| | ||||| || || ||||||| || || ||| | || Sbjct 27605038 GAGTGTTCTTCCATCTTCAAGCTGTTTGCCAGCAAAGATCAATCGTTGCTGATCAGGAGG 27605097 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 |||||||||||||| || || || ||||| || || ||||| | || | ||| || Sbjct 27605098 AATTCCTTCTTTATCTTGAATCTTAGCTTTAACATTCTCTATTGTGTCTGAAGCTTCAAC 27605157 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| | || || ||||| || || ||||| ||||| || || ||||| Sbjct 27605158 TTCTAAGGTAATTGTCTTGCCAGTGAGAGTTTTGACAAAGATTTGCAT 27605205 Score = 107 bits (118), Expect = 5e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || || ||||| | ||| | || | || |||||| || ||||| || || Sbjct 27601410 TCCTCCTCGAAGTCTCAATACCAAGTGCAATGTAGATTCTTTCTGAATATTGTAATCTAA 27601469 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || | ||| ||||| | ||||||||| || || |||| || || ||| | || Sbjct 27601470 GAGTGTTCTTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCGTTGCTGATCAGGAGG 27601529 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 |||||||||||||| || || || || || || |||||||| | ||| | ||| || Sbjct 27601530 AATTCCTTCTTTATCTTGAATCTTAGCCTTTACATTTTCTATGGTATCCGAAGCTTCAAC 27601589 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||| || || || || || || || ||||| || || || || |||||| Sbjct 27601590 TTCAAGTGTAATAGTTTTTCCAGTAAGAGTTTTAACAAAGATTTGCATT 27601638 Score = 107 bits (118), Expect = 5e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315 ||||| | || | ||||| || ||| |||||||||||||| || | || || | Sbjct 27605216 AGTCTCAACACTAAATGAAGTGTAGATTCCTTTTGGATATTATAATCTGAAAGTGTTCTA 27605275 Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCT 288375 || ||||| | |||||| || || || || | ||| |||||| ||| ||||||||| Sbjct 27605276 CCATCTTCAAGTTGTTTGCCAGCAAAAATTAAACGTTGTTGATCTGGTGGAATTCCTTCT 27605335 Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTG 288435 ||||| || || || || || || || ||||| | || | ||| ||||| | ||| Sbjct 27605336 TTATCTTGAATCTTAGCCTTTACATTCTCTATTGTGTCTGAAGCTTCAACTTCTAAGGTG 27605395 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || || || | |||||| || || ||||||||| Sbjct 27605396 ATGGTTTTTCCTGTTAAAGTCTTAACAAAGATCTGCATT 27605434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179573976692638