Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20mellifera_20[refseq_20GCF_5F000002195.4_202011-01-14] 5,321 sequences; 250,287,000 total letters Query= NC_013646.1 Length=38764 Score E Sequences producing significant alignments: (Bits) Value seq3316 87.8 4e-13 >seq3316 Length=958 Score = 87.8 bits (96), Expect = 4e-13 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 18155 TATACGTGGTATGACAGCGTATGGAGCTTATATTAATGAAGCTTCACTTGCTAAACAAGA 18214 ||| |||||||||||||| ||||| ||||| || |||||||| ||||||||||| ||||| Sbjct 165 TATTCGTGGTATGACAGCCTATGGTGCTTACATCAATGAAGCGTCACTTGCTAATCAAGA 224 Query 18215 GGTTTTTGCAGAAATA 18230 || |||| |||||| Sbjct 225 AGTATTTGATGAAATA 240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123915369680252