Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20mellifera_20[refseq_20GCF_5F000002195.4_202011-01-14] 5,321 sequences; 250,287,000 total letters Query= NC_019411.1 Length=219216 Score E Sequences producing significant alignments: (Bits) Value seq3431 201 2e-46 >seq3431 Length=1311 Score = 201 bits (222), Expect = 2e-46 Identities = 381/550 (69%), Gaps = 13/550 (2%) Strand=Plus/Plus Query 136078 CACGCCGGCGTCCTTGCGGCACTCCACGCCCTCGGTGGCCTTGATCTGGTCCTCCAGGGT 136137 |||||| ||||||||||||| | |||||| | ||| | ||| || || || || || Sbjct 770 CACGCCTTCGTCCTTGCGGCAGGCGACGCCCGCCGTGTCGGCGATATGCTCGTCGAGCGT 829 Query 136138 GAAGGTCGCCTTGGCCTGGGTCCGCGACATCGTCCGGCCCGCGCCGTGCGAGCACGAGCA 136197 | | ||||||| ||| || |||||| || ||||||||||| ||| | Sbjct 830 CACCAGCTTCTTGGCCGCGGTGCGGGACATCACGCGCCCCGCGCCGTGGCTGCAGCTGTC 889 Query 136198 GAACGAGTCCGCGTTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGG 136257 ||||||||||| |||||| |||||||||||| | |||||||| ||||| || || || Sbjct 890 GAACGAGTCCGGGTTGCCGAGCCCGCGCACGATGAACGACTTGGCGCCCATGGAACCCGG 949 Query 136258 GATGATCCCGAACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCA 136317 ||||||||| | | | |||| ||| |||||| ||||||||||| || | || Sbjct 950 GATGATCCCCAGCACGCCCTTGGCCGCGCGCACCGCCCCCTTGCGGGTGACCAGCACATT 1009 Query 136318 CTCGTCGAAGTGGAATTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTC 136377 |||| |||| ||| || | || |||||||||||||||||||| || ||| || Sbjct 1010 CTCGCCGAAATGGTTCTCGCGCGTCACATAGTTGTGGTGGCAGTTCACTGCCTCCAGTTC 1069 Query 136378 CGTCTTGAACGGC--GGCAGGCCCGACGCTCGCATGGCCTCCAGGACCCGGACCATCATC 136435 || | ||||||| ||| | | | | |||| ||| | | ||| | ||||||| Sbjct 1070 CGCGTCGAACGGCTTGGC--GATCTGCCCGCGCAGGGCGGCGATGACGTTGGTCATCATC 1127 Query 136436 ATCTCGCGGTTGATCCGCGCGAAGTCCTGGCCCCAGGCGACGGCTTCCACGTAGTCGTGG 136495 ||| ||||||| | || ||||||| ||||| |||| || || || || |||| | Sbjct 1128 ATCCGCCGGTTGAGCGCGGCATAGTCCTGCGCCCAGCCGACCGCCTCGACATAATCGTCG 1187 Query 136496 AACT--CCGGCTCGCCTTCGCAGAGCCAAGCAAGGTCCTTGTCCAGC-GGCTTACGCCCG 136552 || | ||| || ||||| || | || ||||||| || || || | | | | Sbjct 1188 AAATGGTCGG-TC-CCTTCCGGGAAATAGGCGAGGTCCTGATCGGGCAGGTTGATG--TG 1243 Query 136553 TCACGGCGCAGCATCATCTCCTTGGCCTTCTCGATGAAGATGCGGCCGATGGTGTTGCCG 136612 ||| || |||| || ||| ||| |||||||||| | |||||||| ||||||| Sbjct 1244 CCAC-TTGC-GCATGTCCTGCTTCGCCAGTTCGATGAAGAAGGTGCCGATGGCGTTGCCG 1301 Query 136613 ACGCCGCGCG 136622 |||||||||| Sbjct 1302 ACGCCGCGCG 1311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701316550580160