Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20mellifera_20[refseq_20GCF_5F000002195.4_202011-01-14] 5,321 sequences; 250,287,000 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq6 107 1e-18 >seq6 Length=18472937 Score = 107 bits (118), Expect = 1e-18 Identities = 129/175 (74%), Gaps = 3/175 (2%) Strand=Plus/Minus Query 25015 AAATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTC 25074 ||| ||||| || | |||||||||| | | | || ||| ||||||| | | |||| Sbjct 6969821 AAACTCTCCTGATAGAACTCTTCTTGTGTAAATATTGCTGGTGTATGGTTCTATAGATTC 6969762 Query 25075 ATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATT 25134 |||||||||||| ||||| | || |||||||||||||| ||| ||||| | ||||| Sbjct 6969761 ATTATTTCCTAAAATTTGTGCTGTTGATGCTGTTGGCATAGGTGCAATTAACAAAGAATT 6969702 Query 25135 TCTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATC---TAAATTA 25186 ||| | |||| |||| |||| | || ||| || || |||||| ||||||| Sbjct 6969701 TCTAACTCCATGTTTAGCAATTTTTTTTTTCAAAATAGTCCAATCCCATAAATTA 6969647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253023590435075