Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20mellifera_20[refseq_20GCF_5F000002195.4_202011-01-14] 5,321 sequences; 250,287,000 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq6 199 7e-46 seq1 170 3e-37 seq4 154 3e-32 seq2 86.0 1e-11 >seq6 Length=18472937 Score = 199 bits (220), Expect = 7e-46 Identities = 187/238 (79%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||| | | ||| | || ||||| | ||||| ||||| |||||| Sbjct 4825202 AATTTGCATACCACCGCGAAGTCGCAAAACAAGATGAAGTGTAGATTCTTTTTGAATATT 4825143 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || ||||| | || | | ||| || | |||||| |||||||| |||||||||||||| Sbjct 4825142 GTAATCGGAAAGAGTACGACCATCTTCCAGTTGTTTACCGGCAAAGATTAATCTCTGTTG 4825083 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||||||||| || ||||||||||| || ||||||| ||| | |||| ||||||||| || Sbjct 4825082 ATCAGGAGGAATACCTTCTTTATCCTGAATTTTGGCTTTAACATTTTCAATAGTATCTGA 4825023 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 || |||||||||| ||| |||||||| || || || ||||| ||||| ||||||||| Sbjct 4825022 AGCTTCAACTTCTAAAGTAATAGTTTTTCCAGTGAGTGTTTTGACAAAAATTTGCATT 4824965 Score = 192 bits (212), Expect = 1e-43 Identities = 205/270 (76%), Gaps = 2/270 (1%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || |||||||| || || ||||| | ||| | ||| | |||||| |||||| Sbjct 4824746 AATTTGCATTCCACCTCTTAAACGTAGTACTAAATGTAGTGTTGACTCTTTTTGAATATT 4824687 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || ||||| || | ||| ||||||||||| || ||||| || ||||| || || Sbjct 4824686 ATAATCAGATAATGTACGCCCATCTTCTAATTGTTTACCAGCAAAGATCAATCTTTGCTG 4824627 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| || || |||||||| || ||||| ||||| | ||||| |||| ||| ||||| || Sbjct 4824626 ATCTGGTGGAATTCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATGGTATCTGA 4824567 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcat--t 193361 | |||||| || |||||||| ||||||||||| | ||||| ||||| || ||||| | Sbjct 4824566 GGCCTCAACCTCCAGAGTTATTGTTTTACCTGTCAATGTTTTGACAAAGATCTGCATGAT 4824507 Query 193362 ttattagtaaaataattattttaaataata 193391 || | |||| |||||||| | ||| || Sbjct 4824506 TTCTGTAAAAAAAAATTATTTAATATATTA 4824477 Score = 188 bits (208), Expect = 1e-42 Identities = 184/237 (78%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||| | | ||| | || ||||| | ||||| |||||| |||||| Sbjct 4825430 AATTTGCATACCACCACGAAGTCGCAAAACAAGATGAAGTGTAGACTCTTTTTGAATATT 4825371 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || ||||| | || | | ||| |||||||||||||| ||||| || ||||||||||| Sbjct 4825370 GTAATCGGAAAGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAGATCAATCTCTGTTG 4825311 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 |||||||| || |||||||| ||||| || || | ||||| |||| ||| ||||| || Sbjct 4825310 GTCAGGAGGAATACCTTCTTTGTCTTGAATCTTAGCTTTTACATTTTCAATGGTATCAGA 4825251 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcat 193360 || || ||||| ||||| |||||||| ||||| || ||||| || || |||||||| Sbjct 4825250 AGCTTCTACTTCAAGAGTAATAGTTTTTCCTGTAAGGGTTTTGACGAAAATTTGCAT 4825194 Score = 187 bits (206), Expect = 4e-42 Identities = 184/238 (77%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||| | | ||| | || ||||| | ||||| |||||| |||||| Sbjct 4826570 AATTTGCATACCACCACGAAGTCGCAAAACAAGATGAAGTGTAGACTCTTTTTGAATATT 4826511 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || ||||| | || | | ||| || | |||||| || ||||| |||||||||||||| Sbjct 4826510 GTAATCGGAAAGAGTACGACCATCCTCCAGTTGTTTACCAGCAAAGATTAATCTCTGTTG 4826451 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 |||||| || || |||||||| ||||| ||||||| ||| | |||| ||| |||||||| Sbjct 4826450 ATCAGGGGGAATACCTTCTTTGTCTTGAATTTTGGCTTTCACATTTTCAATGGTATCGGA 4826391 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 || || ||||| ||||| ||||| || ||||| || ||||| || || ||||||||| Sbjct 4826390 AGCTTCTACTTCAAGAGTAATAGTCTTTCCTGTAAGAGTTTTGACGAAAATTTGCATT 4826333 Score = 185 bits (204), Expect = 2e-41 Identities = 183/237 (77%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||| | | ||| || || ||||| | ||||| ||||| |||||| Sbjct 4825886 AATTTGCATACCACCACGAAGTCGTAGAACGAGATGAAGTGTAGATTCTTTTTGAATATT 4825827 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || ||||| | || | | ||| |||||||||||||| ||||| || ||||| ||||| Sbjct 4825826 GTAATCGGAAAGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAGATCAATCTTTGTTG 4825767 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 |||||||| || |||||||| ||||| || || | ||||| |||| ||||||||| || Sbjct 4825766 GTCAGGAGGAATACCTTCTTTGTCTTGAATCTTAGCTTTTACATTTTCAATAGTATCAGA 4825707 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcat 193360 || || ||||| ||||| ||||| || ||||| || ||||| || || |||||||| Sbjct 4825706 AGCTTCTACTTCAAGAGTAATAGTCTTTCCTGTAAGGGTTTTGACGAAAATTTGCAT 4825650 Score = 181 bits (200), Expect = 2e-40 Identities = 183/238 (77%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || ||||| | | ||| | || ||||| | ||||| ||||| |||||| Sbjct 4824974 AATTTGCATTCCACCACGAAGTCGCAAAACAAGATGAAGTGTAGATTCTTTTTGAATATT 4824915 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || ||||| | || | | ||| || | ||||| |||||||| || ||||||||||| Sbjct 4824914 GTAATCGGAAAGAGTACGACCATCTTCCAGCTGTTTACCGGCAAAGATCAATCTCTGTTG 4824855 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||||||||| || ||||||||||| || ||||| | ||| | |||| ||||||||| || Sbjct 4824854 ATCAGGAGGAATACCTTCTTTATCCTGAATTTTAGCTTTAACATTTTCAATAGTATCTGA 4824795 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 || |||||||||| ||| |||||||| || || || ||||| ||||| ||||||||| Sbjct 4824794 AGCTTCAACTTCTAAAGTAATAGTTTTTCCAGTGAGTGTTTTGACAAAAATTTGCATT 4824737 Score = 179 bits (198), Expect = 7e-40 Identities = 182/237 (77%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||| | | ||| || || ||||| | || | ||||| |||||| Sbjct 4825658 AATTTGCATACCACCGCGAAGTCGTAGAACGAGATGAAGGGTCGATTCTTTTTGAATATT 4825599 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| ||||| | || | | ||| || | |||||| |||||||| || ||||||||||| Sbjct 4825598 ATAATCGGAAAGAGTACGACCATCTTCCAGTTGTTTACCGGCAAAGATCAATCTCTGTTG 4825539 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| || ||||||||||| || ||||||| ||| | |||| ||| ||||| || Sbjct 4825538 ATCTGGAGGAATACCTTCTTTATCCTGAATTTTGGCTTTAACATTTTCAATGGTATCTGA 4825479 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcat 193360 || |||||||| ||||| ||||| || ||||| || ||||| || || |||||||| Sbjct 4825478 AGCTTCAACTTCGAGAGTAATAGTCTTTCCTGTAAGGGTTTTGACGAAAATTTGCAT 4825422 Score = 178 bits (196), Expect = 2e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 |||||||| | |||||||| || || | || | ||||| ||||||||| ||||| Sbjct 4826789 ACCACCTCGGAGACGAAGTACAAGGTGAAGAGTCGATTCTTTTTGAATATTATAATCGGA 4826730 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 | || | | ||| || | ||||| || |||||||| |||||||||||||||||||| Sbjct 4826729 AAGTGTACGACCATCTTCCAGCTGTTTACCAGCAAAAATCAATCTCTGTTGATCAGGAGG 4826670 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 || |||||||| ||||| ||||| | ||||| |||| ||| || || |||| ||||| Sbjct 4826669 AATACCTTCTTTGTCTTGAATTTTTGCTTTTACATTTTCAATTGTGTCAGAAGCTTCAAC 4826610 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcat 193360 ||| ||||| ||||||||||| || || || || ||||| |||||||| Sbjct 4826609 TTCAAGAGTAATAGTTTTACCCGTGAGAGTCTTGACAAAAATTTGCAT 4826562 Score = 158 bits (174), Expect = 2e-33 Identities = 177/237 (75%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || ||||||||||| || | ||| | ||| ||||| | ||||| |||||| Sbjct 4826114 AATTTGCATTCCACCTCTCAAACGCAATACTAAATGTAATGTTGATTCTTTTTGAATATT 4826055 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || | || | | ||| || | ||||| || |||||||| |||||||| || Sbjct 4826054 ATAATCCGAAAGTGTACGACCATCTTCCAGCTGTTTACCAGCAAAAATCAATCTCTGCTG 4825995 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| || || || |||||||| ||||| ||||| | |||| ||||||||||| Sbjct 4825994 ATCTGGAGGAATACCCTCCTTATCTTGAATTTTAGTTTTAACATTTTCGATAGTATCGGA 4825935 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcat 193360 | ||||| || | ||| || ||||| || || || || || || || |||||||| Sbjct 4825934 TGCTTCAACCTCCAAAGTGATGGTTTTTCCGGTAAGAGTCTTAACGAAAATTTGCAT 4825878 Score = 154 bits (170), Expect = 3e-32 Identities = 177/238 (74%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || || |||| ||| || | ||| | ||| | ||| | ||||| |||||| Sbjct 4826342 AATTTGCATTCCTCCTCGCAAACGCAATACTAAATGTAGTGTTGATTCTTTTTGAATATT 4826283 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || || || | || | | ||| || | |||||| || |||||||| |||||||| || Sbjct 4826282 GTAATCCGAAAGTGTACGACCATCTTCCAGTTGTTTACCAGCAAAAATCAATCTCTGCTG 4826223 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| || || || |||||||| ||||| ||||| | |||| |||||||||||| Sbjct 4826222 ATCTGGAGGGATACCCTCCTTATCTTGAATTTTAGTTTTAACATTTTCAATAGTATCGGA 4826163 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 | ||||| || | ||| || ||||| || || || ||||| || || ||||||||| Sbjct 4826162 TGCTTCAACCTCCAAAGTGATGGTTTTTCCGGTAAGAGTTTTGACGAAAATTTGCATT 4826105 >seq1 Length=29893408 Score = 170 bits (188), Expect = 3e-37 Identities = 180/237 (76%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| || || |||| | || | ||||||||| | |||| ||||| |||||| Sbjct 27602314 ATTTGCATTCCCCCTCGAAGTCTCAATACCAGATGAAGAGTAGATTCTTTCTGAATATTG 27602373 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || || || | ||||| ||| ||||||||||| || ||||| ||||| | |||||| Sbjct 27602374 TAATCTGAGAGTGTTCTTCCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGA 27602433 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 |||||||| ||||||||||| ||||| || || | |||| ||| || ||||| ||| Sbjct 27602434 TCAGGAGGAATTCCTTCTTTGTCTTGAATCTTAGCCTTTACGTTTTCTATTGTATCTGAA 27602493 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 | |||||||| ||||| |||||||| || ||||| ||||| ||||| ||||||||| Sbjct 27602494 GCTTCAACTTCAAGAGTGATAGTTTTCCCAGTTAGAGTTTTGACAAAAATTTGCATT 27602550 Score = 165 bits (182), Expect = 1e-35 Identities = 163/211 (77%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 193151 TACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTC 193210 ||||| |||||||||| ||||| |||||| || || | | ||||| ||| || Sbjct 27601428 TACCAAGTGCAATGTAGATTCTTTCTGAATATTGTAATCTAAGAGTGTTCTTCCATCTTC 27601487 Query 193211 TAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTG 193270 | ||||||||| |||||||| |||| || ||||||||||| ||||||||||||||||| Sbjct 27601488 AAGTTGTTTTCCAGCAAAAATCAATCGTTGCTGATCAGGAGGAATTCCTTCTTTATCTTG 27601547 Query 193271 TATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTT 193330 || || | |||| |||| || ||||| |||| |||||||| || || |||||||| Sbjct 27601548 AATCTTAGCCTTTACATTTTCTATGGTATCCGAAGCTTCAACTTCAAGTGTAATAGTTTT 27601607 Query 193331 ACCTGTTAGCGtttttacaaatatttgcatt 193361 || || || ||||| ||||| ||||||||| Sbjct 27601608 TCCAGTAAGAGTTTTAACAAAGATTTGCATT 27601638 Score = 159 bits (176), Expect = 6e-34 Identities = 162/211 (77%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 193151 TACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTC 193210 ||||||||| | |||| ||||| |||||| || || || | ||||| ||| || Sbjct 27601656 TACCAGATGAAGAGTAGATTCTTTCTGAATATTGTAATCTGAGAGTGTTCTTCCATCTTC 27601715 Query 193211 TAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTG 193270 | |||||||| ||||| || |||| || ||||||||||| ||||||||||| ||||| Sbjct 27601716 AAGCTGTTTTCCAGCAAAGATCAATCGTTGCTGATCAGGAGGAATTCCTTCTTTGTCTTG 27601775 Query 193271 TATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTT 193330 || || | ||||| ||| || ||||| |||| |||||||| ||||| |||||||| Sbjct 27601776 AATCTTAGCTTTTACGTTTTCTATTGTATCTGAAGCTTCAACTTCAAGAGTGATAGTTTT 27601835 Query 193331 ACCTGTTAGCGtttttacaaatatttgcatt 193361 || ||||| ||||| ||||| ||||||||| Sbjct 27601836 CCCAGTTAGAGTTTTGACAAAAATTTGCATT 27601866 Score = 159 bits (176), Expect = 6e-34 Identities = 178/238 (75%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || || |||| | || | ||||||||| | |||| ||||| |||||| Sbjct 27601857 AATTTGCATTCCTCCTCGAAGTCTTAATACCAGATGAAGAGTAGATTCTTTCTGAATATT 27601916 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || || || | ||||| ||| ||||||||||| || ||||| ||||| | ||||| Sbjct 27601917 GTAATCTGAGAGTGTTCTTCCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTG 27601976 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||||||||| ||||||||||| ||||| || || | |||| || || ||||| || Sbjct 27601977 ATCAGGAGGAATTCCTTCTTTGTCTTGAATCTTAGCCTTTACGTTCTCTATTGTATCCGA 27602036 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 || |||||||| ||||| |||||||| || || || ||||| ||||| || |||||| Sbjct 27602037 AGCTTCAACTTCAAGAGTGATAGTTTTCCCAGTAAGAGTTTTGACAAAAATCTGCATT 27602094 Score = 158 bits (174), Expect = 2e-33 Identities = 177/237 (75%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || || |||| | || | ||||||||| | |||| ||||| |||||| Sbjct 27602541 AATTTGCATTCCTCCTCGAAGTCTTAATACCAGATGAAGAGTAGATTCTTTCTGAATATT 27602600 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || || || | ||||| ||| || | |||||||| |||||||| || | ||||| Sbjct 27602601 GTAATCTGAGAGTGTTCTTCCATCTTCAAGCTGTTTTCCAGCAAAAATCAAACGTTGTTG 27602660 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||||||||| ||||||||||| ||||| || || | ||||| || || ||||| || Sbjct 27602661 ATCAGGAGGAATTCCTTCTTTGTCTTGAATCTTAGCTTTTACGTTCTCTATTGTATCTGA 27602720 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcat 193360 || |||||||| ||||| |||||||| || || || ||||| ||||| |||||||| Sbjct 27602721 AGCTTCAACTTCAAGAGTGATAGTTTTCCCAGTAAGAGTTTTAACAAAAATTTGCAT 27602777 Score = 156 bits (172), Expect = 8e-33 Identities = 161/211 (76%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 193151 TACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTC 193210 ||||| ||| | |||| ||||| |||||| || || || | ||||| ||| || Sbjct 27602112 TACCAAATGAAGAGTAGATTCTTTCTGAATATTGTAATCTGAGAGTGTTCTTCCATCTTC 27602171 Query 193211 TAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTG 193270 | ||||||||| ||||||||||| | |||||||||||||| ||||||||||| ||||| Sbjct 27602172 AAGTTGTTTTCCAGCAAAAATTAAACGTTGTTGATCAGGAGGAATTCCTTCTTTGTCTTG 27602231 Query 193271 TATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTT 193330 || || | |||| || || ||||| |||| ||||| || ||||| |||||||| Sbjct 27602232 AATCTTAGCCTTTACGTTCTCTATTGTATCCGAAGCTTCAACCTCAAGAGTGATAGTTTT 27602291 Query 193331 ACCTGTTAGCGtttttacaaatatttgcatt 193361 || ||||| ||||| ||||| ||||||||| Sbjct 27602292 TCCAGTTAGAGTTTTGACAAAGATTTGCATT 27602322 Score = 147 bits (162), Expect = 4e-30 Identities = 147/191 (77%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 193170 TCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAA 193229 ||||| ||| ||||| || || | ||||| ||| ||||||||||| || ||||| Sbjct 27604559 TCTTTCTGAATGTTATAATCTGAAAGAGTTCTTCCATCTTCTAATTGTTTACCAGCAAAG 27604618 Query 193230 ATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTT 193289 ||||| | |||||||||||||| ||||||||||| ||||| || || | ||| | ||| Sbjct 27604619 ATTAAACGTTGTTGATCAGGAGGAATTCCTTCTTTGTCTTGAATCTTAGCTTTAACATTC 27604678 Query 193290 AAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttaca 193349 || ||||| |||| |||||||||| || || |||||||| || || ||||| ||| Sbjct 27604679 TCTATTGTATCTGAAGCTTCAACTTCTAAGGTAATGGTTTTACCAGTGAGAGTTTTGACA 27604738 Query 193350 aatatttgcat 193360 || |||||||| Sbjct 27604739 AAGATTTGCAT 27604749 Score = 143 bits (158), Expect = 5e-29 Identities = 175/239 (73%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| ||||| ||||| | || | || | ||| | ||||| || || |||||| Sbjct 27605198 ATTTGCATACCTCCTCTAAGTCTCAACACTAAATGAAGTGTAGATTCCTTTTGGATATTA 27605257 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || || || | |||||| ||| || | |||||| || ||||||||||| | |||||| Sbjct 27605258 TAATCTGAAAGTGTTCTACCATCTTCAAGTTGTTTGCCAGCAAAAATTAAACGTTGTTGA 27605317 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || ||||||||||||||||| || || | |||| ||| || || || ||| Sbjct 27605318 TCTGGTGGAATTCCTTCTTTATCTTGAATCTTAGCCTTTACATTCTCTATTGTGTCTGAA 27605377 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatttt 193363 | |||||||||| || || ||||| ||||||| || || ||||| || |||||||| Sbjct 27605378 GCTTCAACTTCTAAGGTGATGGTTTTTCCTGTTAAAGTCTTAACAAAGATCTGCATTTT 27605436 Score = 140 bits (154), Expect = 6e-28 Identities = 173/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| ||||| ||||| | || | || | ||| | ||||| || || |||||| Sbjct 27604742 ATTTGCATACCTCCTCTAAGTCTCAACACTAAATGGAGTGTAGATTCCTTTTGGATATTA 27604801 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || || || | ||||| ||| |||| |||||| || ||||| || || | || ||| Sbjct 27604802 TAATCTGAGAGAGTTCTTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAGCGTTGCTGA 27604861 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 ||||| || ||||||||||| ||||| || || | |||| |||| || || || ||| Sbjct 27604862 TCAGGGGGAATTCCTTCTTTGTCTTGAATCTTAGCCTTTACATTTTCTATTGTGTCTGAA 27604921 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 | |||||||| || || |||||||| || || || ||||| ||||| ||||||||| Sbjct 27604922 GCTTCAACTTCAAGTGTGATAGTTTTTCCAGTAAGAGTTTTGACAAAAATTTGCATT 27604978 Score = 140 bits (154), Expect = 6e-28 Identities = 173/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || || |||| | || | ||||||||| | |||| ||||| |||||| Sbjct 27604969 AATTTGCATTCCTCCTCGAAGTCTCAATACCAGATGAAGAGTAGATTCTTTCTGAATATT 27605028 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || | ||||| ||| || | ||||| || ||||| || |||| || || Sbjct 27605029 ATAATCTGAGAGTGTTCTTCCATCTTCAAGCTGTTTGCCAGCAAAGATCAATCGTTGCTG 27605088 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||||||||| ||||||||||||||||| || || | ||| | ||| || || || || Sbjct 27605089 ATCAGGAGGAATTCCTTCTTTATCTTGAATCTTAGCTTTAACATTCTCTATTGTGTCTGA 27605148 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcat 193360 || |||||||||| || || || || || || || ||||| ||||| |||||||| Sbjct 27605149 AGCTTCAACTTCTAAGGTAATTGTCTTGCCAGTGAGAGTTTTGACAAAGATTTGCAT 27605205 >seq4 Length=12718334 Score = 154 bits (170), Expect = 3e-32 Identities = 144/183 (79%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 |||||||||||| ||||| || | | ||| || ||||| ||||| |||||||| | | Sbjct 12038490 AATATTATAGTCCGATAAAGTACGACCATCTTCCAATTGCTTTCCAGCAAAAATAAGACG 12038549 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 || |||||||| ||||||||||||||||| || ||||| | ||| | |||| ||||| Sbjct 12038550 TTGCTGATCAGGTGGTATTCCTTCTTTATCCTGAATTTTAGCTTTCACATTTTCTATAGT 12038609 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttg 193357 ||| || | || ||||| ||||| ||||||||||| || | ||||| |||||||| || Sbjct 12038610 ATCTGATGCTTCTACTTCAAGAGTGATAGTTTTACCCGTCAAAGTTTTCACAAATATCTG 12038669 Query 193358 cat 193360 ||| Sbjct 12038670 CAT 12038672 Score = 104 bits (114), Expect = 4e-17 Identities = 99/127 (78%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 |||||| || || || || |||| ||| ||||||| || || ||||||||| || || Sbjct 4835651 ACCACCCCTTAAACGTAGCACCAAATGTAATGTAGATTCCTTCTGAATATTATAATCTGA 4835710 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 | || ||| ||| || ||||||||||| |||||||||||||| |||||| |||| || Sbjct 4835711 AAGTGTCCTACCATCTTCCAATTGTTTTCCAGCAAAAATTAATCTTTGTTGACCAGGTGG 4835770 Query 193253 TATTCCT 193259 |||||| Sbjct 4835771 AATTCCT 4835777 Score = 96.9 bits (106), Expect = 6e-15 Identities = 139/187 (74%), Gaps = 13/187 (7%) Strand=Plus/Plus Query 193253 TATT-CCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAA 193311 |||| |||||||||||||| ||||| | ||| | |||| ||| ||||| || | |||| Sbjct 4835831 TATTACCTTCTTTATCTTGAATTTTTGCTTTAACATTTTCAATGGTATCTGATGCTTCAA 4835890 Query 193312 CTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcat--tttat-tag 193368 |||| ||||| ||||| || || ||||| || || |||||||| ||||| | || || Sbjct 4835891 CTTCAAGAGTAATAGTCTTGCCAGTTAGAGTCTTCACAAATATCTGCATGGTGAATCTAA 4835950 Query 193369 taaaataattattttaaataatatatactttatattttaacattatattatacaatgaaa 193428 ||| || ||| | |||| ||| || ||| || || ||| ||||||||| ||| Sbjct 4835951 ACAAACAA-TATATGAAAT-TTATTTAATTT---TTGTATAATT-TATTATACA---AAA 4836001 Query 193429 atttatt 193435 ||||||| Sbjct 4836002 ATTTATT 4836008 >seq2 Length=15549267 Score = 86.0 bits (94), Expect = 1e-11 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 146173 TTGGCCACCATCTATTTCACAAAAACCAGAAGACTTAGCAGAAGCTGGATTCTTTTATAC 146232 ||||||| || ||| | ||||| | |||| | |||||||| || || || | |||||| Sbjct 9255993 TTGGCCAAAATTTATGTTACAAACAAAAGAACAATTAGCAGATGCAGGTTTTTATTATAC 9255934 Query 146233 GGGATTAAGCGATAAAGTTAAATGCTTCTATTGTGATGGCGGATTAAAAGATTGGAAAGC 146292 ||| ||| ||| || || ||| | ||||||| | || |||||||||||| || | Sbjct 9255933 AGGAAAAAGTGATCAAACTATATGTTATTATTGTGGATGTGGTTTAAAAGATTGGGAACC 9255874 Query 146293 GGGTGAATTACCTTGGAAAGAACACGCTCGTTGGTATGATAAATGTGAATATGTAAAAAT 146352 | || |||||| || |||| || |||||| ||||||| | ||| || ||| Sbjct 9255873 AGAAGATAATCCTTGGGAACAACATGCAAAATGGTATTCTAAATGTTATTATTTATTAAT 9255814 Query 146353 AGTAAAAGGTTTAGATT 146369 | ||||| ||||| Sbjct 9255813 GATTAAAGGACAAGATT 9255797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899594561736720