Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20mellifera_20[refseq_20GCF_5F000002195.4_202011-01-14] 5,321 sequences; 250,287,000 total letters Query= NC_021806.1 Length=100418 Score E Sequences producing significant alignments: (Bits) Value seq16 96.9 2e-15 >seq16 Length=7207165 Score = 96.9 bits (106), Expect = 2e-15 Identities = 164/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 96160 GCTAATACTGTAGCTGTGGTTGTTCCATCTCCTACTTCTGTATTAGTATTCTCAGCTACT 96219 || || ||||||||||| ||||| ||||| ||| | ||| ||| ||||| | ||||| Sbjct 1815398 GCCAAAACTGTAGCTGTAGTTGTACCATCACCTGCCTCTTCATTCGTATTATTTGCTACA 1815457 Query 96220 TGTT-TAATCATTTGAGCACCTAAGTTTTCAAATGGATCTTCTAAATGAATTTCTCTAGC 96278 | || || | |||| || || | || | |||| ||||| ||| | || | || |||| Sbjct 1815458 TCTTGTACTAATTT-TGCTCCAATATTCTGAAATTTATCTTTTAATTCAACTCCTTTAGC 1815516 Query 96279 CACACTTACACCATCTTTAGTAATGATTGGATTATACTGGTCTAAACCTAGTATAACATT 96338 || | ||||||||||||||||| ||||| || | | ||| |||||||| Sbjct 1815517 AACTGTAACACCATCTTTAGTAATTTTTGGACTACCCCAACTTTGTTCTAAGATAACATT 1815576 Query 96339 CTTACCTGATGGTCCTAGAGTTACTTTAACTGCATTAGCTAAAGCATCTACACCT 96393 ||| ||| || | |||||| |||||||| |||||| ||| |||||| Sbjct 1815577 ACGTCCTTTTGGACCCATTGTTACTGCAACTGCATCTGCTAAAATATCAACACCT 1815631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 321191969450299