Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20mellifera_20[refseq_20GCF_5F000002195.4_202011-01-14] 5,321 sequences; 250,287,000 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq6 91.5 1e-13 >seq6 Length=18472937 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| || ||||| ||||| || |||| | ||| |||| || | ||| || || || || Sbjct 4824701 CTCTTTTTGAATATTATAATCAGATAATGTACGCCCATCTTCTAATTGTTTACCAGCAAA 4824642 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| || |||||| ||| | || | || |||||||| | ||||| ||| || Sbjct 4824641 GATCAATCTTTGCTGATCTGGTGGAATTCCTTCCTTGTCTTGAATTTTCGCTTTTACATT 4824582 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || | || |||||| || || | ||||| || || || || | || || || Sbjct 4824581 TTCAATGGTATCTGAGGCCTCAACCTCCAGAGTTATTGTTTTACCTGTCAATGTTTTGAC 4824522 Query 34966 AAAGATCTGCATGAT 34980 ||||||||||||||| Sbjct 4824521 AAAGATCTGCATGAT 4824507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325671678923699