Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20mellifera_20[refseq_20GCF_5F000002195.4_202011-01-14] 5,321 sequences; 250,287,000 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq3431 178 4e-40 >seq3431 Length=1311 Score = 178 bits (196), Expect = 4e-40 Identities = 263/370 (71%), Gaps = 2/370 (1%) Strand=Plus/Minus Query 37144 GAAAATCACTTCGGCGCAAACGTGCTGGTTACCCGCAAAGGTGCTGTTCGGGCCCGCGAG 37203 || || || ||||||| || |||||||| |||||||| || || || || || | || Sbjct 1027 GAGAACCATTTCGGCGAGAATGTGCTGGTCACCCGCAAGGGGGCGGTGCGCGCGGCCAAG 968 Query 37204 GGCGACCTGGGCATCATCCCTGGCTCGATGGGTGCGAAGTCATTCATCGTTCGCGGCAAG 37263 |||| ||||| |||||||| || || ||||| || ||||| |||||||| ||||| Sbjct 967 GGCGTGCTGGGGATCATCCCGGGTTCCATGGGCGCCAAGTCGTTCATCGTGCGCGGGCTC 908 Query 37264 GGAAATTCCGAATCGTTCTGCTCTTGCAGCCACGGTGCCGGTCGAATGATGAGCCGGGCC 37323 || || | || |||||| | ||||||||||| || || || ||||| ||| || Sbjct 907 GGCAACCCGGACTCGTTCGACAGCTGCAGCCACGGCGCGGGGCGCGTGATGTCCCGCACC 848 Query 37324 GAAG-CAAAACGCCGGTTCACAGTCGAGGATCATGAGGCGGCCACCAAAGGTATCGAGTG 37382 | | ||| | || || | || |||| || ||| || | ||| || ||| || Sbjct 847 GCGGCCAAGAAGCTGG-TGACGCTCGACGAGCATATCGCCGACACGGCGGGCGTCGCCTG 789 Query 37383 CCGCAAAGATGCCGAAGTGATCGACGAGACGCCAGCGGCTTACAAGGACATCGATGCGGT 37442 |||||| || | | ||||||||||||||||| ||| || ||| ||||| || || Sbjct 788 CCGCAAGGACGAAGGCGTGATCGACGAGACGCCCAGGGCCTATAAGCCGATCGAAGCCGT 729 Query 37443 CATGGCCGCGCAATCCGCCCTGGTGGACATCGTGCACACGCTGCGCCAAGTCGTTTGCGT 37502 ||||| || || ||| |||||||| ||||| |||||| || || || || ||||| Sbjct 728 GATGGCTGCCCAGGCCGATCTGGTGGAGATCGTCCACACGTTGAAGCAGGTGGTGTGCGT 669 Query 37503 GAAGGGTTGA 37512 |||||| ||| Sbjct 668 GAAGGGGTGA 659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139274399129852