Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20mellifera_20[refseq_20GCF_5F000002195.4_202011-01-14] 5,321 sequences; 250,287,000 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1 479 2e-129 seq15 372 2e-97 seq3 158 9e-33 seq110 125 5e-23 seq6 116 3e-20 seq5 86.0 5e-11 >seq1 Length=29893408 Score = 479 bits (530), Expect = 2e-129 Identities = 903/1319 (68%), Gaps = 8/1319 (1%) Strand=Plus/Minus Query 281381 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 281440 || |||||||| || || || ||| || ||||||||| | |||| ||||| ||| Sbjct 7310869 TTGGTAATAGTGATTTTGTTCTCTTTACCAGTAGATTTATCAACTGCAGAGACATTGAGA 7310810 Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500 |||||||||||||| | |||||| ||||||||||||||||| || |||| |||| || Sbjct 7310809 ATACCATTGGCATCGATATCAAAGGTGACTTCAATTTGAGGAACTCCTCGAGGAGCTGGA 7310750 Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560 || || || | | |||| | || | ||| |||||||| || | ||||| Sbjct 7310749 GGAATGCCGCTGAGCTCAAATTTACCTAACAGATTGTTATCTTTCGTCATAGCACGTTCT 7310690 Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620 || || | | ||| || || | | ||||||||| | ||| || || || | Sbjct 7310689 CCTTCATAGACTTGAATCAATACACCTGGTTGATTATCAGCATATGTAGTGAAGGTTTGA 7310630 Query 281621 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCT 281680 | || || ||||| || || ||||| | ||||| | ||||||| ||||||||| Sbjct 7310629 GTTTGCTTTGTTGGAATGGTAGTATTTCTCTTAATAAGAGCAGTCATAACACCACCAGCA 7310570 Query 281681 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCA 281740 ||||| | ||||||||| ||||| || ||||||| || | | || ||| | || |||| Sbjct 7310569 GTTTCAATACCAAGAGATAGAGGTGTTACATCAAGAAGTAATAGATCTTGTACTTCTTCA 7310510 Query 281741 TCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCA 281800 | | |||| |||||| || ||||| | |||||| |||||||| ||||| |||||| Sbjct 7310509 GATTTATCACCATGAAGAATGGCAGCTTGCACAGCAGCTCCATATGCCACAGCCTCATCA 7310450 Query 281801 GGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACC 281860 ||||| | || || ||| | || || |||||||| || | | ||||||| | | | Sbjct 7310449 GGATTGATAGATTTATTCAATTCCTTTCCATTGAAGAAGTCTTGCAGAAGTTTTTGAATC 7310390 Query 281861 TTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGT 281920 |||||||| || | ||||| ||||| | || || || || | ||| | |||||||| | Sbjct 7310389 TTAGGAATTCGCGTGGATCCACCAACCAGAACGATATCGTGAATCTGAGCTTTATCCATT 7310330 Query 281921 TTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAA 281980 || | ||| ||| |||||| || || || || |||| || | || | ||| Sbjct 7310329 TTAGCATCGCGTAATGATTTTTCTACTGGCTCGAGTGTTCCTCTGAAGAGATCAGCACAG 7310270 Query 281981 AGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAA 282040 |||||||| ||| |||||| || | | || | |||| ||||| || | | ||| Sbjct 7310269 AGTTCTTCAAATCGAGCTCTGGTGATCGATGTATAAAAATCGATTCCCTCATAGAGCGAA 7310210 Query 282041 TCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCT 282100 |||| |||||| ||| |||||| || ||||| || | ||||| ||||| ||||| ||| Sbjct 7310209 TCAATTTCAATGCTAGCTTGAGTAGACGAAGACAGAGTGCGTTTCGCACGCTCACAAGCT 7310150 Query 282101 GTCCTTAGTCTTCGTA-AG-GCTTTTGCTGATTGATTCAAATCTGTTTTATATTTTCTCT 282158 || || | | || | || || ||| | | | | |||||| |||||||||| | | Sbjct 7310149 GTTCTCAAACGACGAAGAGCGCGTTTATT--TGCAGTTAAATCTTTTTTATATTTCCGTT 7310092 Query 282159 TGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAG 282218 |||| |||| ||| | | || | ||| |||||||||||||| || || | | | Sbjct 7310091 TGAATTCTTGTACAAAGTGATTAACCATACGGTTATCAAAATCTTCGCCGCCAAGATGGG 7310032 Query 282219 TATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACAT 282278 ||| ||||| || | | || | ||||| |||||||||| | || || | |||| Sbjct 7310031 TATCTCCTGCTGTTGACTTGACCTCGAAAATGCCATCTTCAATGGTCAGAATTGAGACAT 7309972 Query 282279 CATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTAT 282338 || ||| |||||||| | |||||| ||||| || || ||| || ||||||| Sbjct 7309971 CAAAGGTGCCACCACCAAGATCAAAGATAAGGACGTTGCGTTCGCTGGTAGTTTTTTTAT 7309912 Query 282339 CAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGAC 282398 | | ||||| |||| |||||||| || || || |||||||| | |||||||| | | Sbjct 7309911 CCAAGCCATAAGCAATGGCAGCAGCGGTGGGCTCGTTAATAATACGTAAAACATTTAAGC 7309852 Query 282399 CAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAA 282458 | | || | || || || ||||| || || | || || ||||| || || ||||| | Sbjct 7309851 CCGAGATGGTACCAGCGTCCTTAGTTGCCTGACGCTGCGAGTCGTTGAAGTAAGCAGGTA 7309792 Query 282459 CAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCAT-T 282517 |||| || ||||||| | || |||||| | ||| || ||||||| ||||| | Sbjct 7309791 CAGTGATCACGGCATTACTGACAGTTTTTCCCAGATATGCTTCAGCTGTTTCCTTCATCT 7309732 Query 282518 TTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTG-CTTGGATTCATTTTGATA 282576 |||| | | |||||| | || ||| || ||| | | ||| | || || || Sbjct 7309731 TTAC-CAGGACCATTGAACTCACTTCTTC-GGGGAAGAAAGTCTTCGCCTCTCCTTTGTA 7309674 Query 282577 TGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATTTCAT 282636 |||||| || | || || |||| |||| | ||| |||| ||||||| ||||| Sbjct 7309673 ATATACTTGAATTTTAGGCTTGCCACCATCATTTACAACAGTAAAGGGCCAATGCTTCAT 7309614 Query 282637 ATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAA 282695 ||| | |||||| | | || | |||| | |||||| | ||||| ||||| |||| Sbjct 7309613 ATCAGCCTGAACAGTGGGATCTTCAAAACGACGACCAATAAGACGTTTGGCATCTAAAA 7309555 Score = 147 bits (162), Expect = 2e-29 Identities = 147/188 (78%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 282333 TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACAT 282392 |||| || | ||||| |||| |||||| || |||||||||||||| | ||| | || | Sbjct 29272056 TTTTGTCCATGCCATATGCAAGAGCAGCTGCTGTTGGTTCATTAATTACTCTAAGTACGT 29272115 Query 282393 TAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATG 282452 |||| ||||||||| || ||||| || || ||||||||||| ||||| ||||| |||| Sbjct 29272116 TAAGTCCAGCAATTTGACCAGCATCCTTGGTAGCTTGTCTTTGAGAATCATTAAAGTATG 29272175 Query 282453 CAGGAACAGTAATAACGGCATCTGTTACT-TCTTTTCCAATATAAGCGCTTGCTGTTTGT 282511 ||||||||||||| ||||||| | ||||| | | | || ||| | |||||||| | Sbjct 29272176 CAGGAACAGTAATTACGGCATTTTTTACTGACGTATTTAA-ATATGATTCTGCTGTTTCT 29272234 Query 282512 TTCATTTT 282519 |||||||| Sbjct 29272235 TTCATTTT 29272242 Score = 138 bits (152), Expect = 8e-27 Identities = 144/189 (76%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 637115 AGAAAATTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATT 637174 ||| | | ||||| |||| || ||| |||||||| |||||||||||| |||||||| Sbjct 5537756 AGAGAGTGATTGTAGATTTCTCAAGTCCTAATATTGCCAAAGAAATGCATGTTGGACATC 5537815 Query 637175 TAAGATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATG 637234 ||||||| ||||| ||||| || |||| || |||||||| | | ||||| |||| Sbjct 5537816 TAAGATCTACTATAATTGGAGATAGTATTGCAAGATTATTAGAATTTTTAGGACATGATG 5537875 Query 637235 TTTATCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTATA 637294 | | | || |||||||| ||||||||||| || ||||| || ||||| || ||| || Sbjct 5537876 TATTAAGAATAAATCATGTTGGTGATTGGGGCACACAATTTGGAATGTTGATAGCTCATC 5537935 Query 637295 TTAAAAATA 637303 || |||||| Sbjct 5537936 TTCAAAATA 5537944 Score = 116 bits (128), Expect = 3e-20 Identities = 136/184 (74%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 282692 AAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGT 282751 ||||| || ||| | || || | ||| |||| | ||||| ||||| || || | || Sbjct 7307766 AAAATGGTGTTGTTGGGGTTCATGGCAACTTGGTTCTTGGCAGCATCGCCGATTAATCGT 7307707 Query 282752 TCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATA 282811 || || || ||||||| |||||| || ||||| ||||| ||||||||||| || || Sbjct 7307706 TCAGTTTCCGTAAATGCAACATAGCTAGGTGTTGTACGATTTCCTTGATCATTAGCGATG 7307647 Query 282812 ATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATA 282871 ||||| ||||| |||| || ||||||| ||||| | |||| || || | ||||||| Sbjct 7307646 ATTTCTACTTTTCCATGCTGGAATACACCAACACAGGAATAAGTAGTGCCAAGATCAATA 7307587 Query 282872 CCAA 282875 |||| Sbjct 7307586 CCAA 7307583 Score = 104 bits (114), Expect = 2e-16 Identities = 118/155 (76%), Gaps = 4/155 (3%) Strand=Plus/Plus Query 86119 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 86178 || ||||||||||| ||||| |||||||||||||||| | |||| || | | || ||| Sbjct 29272067 CCATATGCAAGAGCAGCTGCTGTTGGTTCATTAATTACTCTAAGTACGTTAAGTCCAGCA 29272126 Query 86179 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 86238 |||| | ||| ||| || |||||||| || | |||||||| ||||| || |||||| Sbjct 29272127 ATTTGACCAGCATCCTTGGTAGCTTGTCTTTGAGAATCATTAAAGTATGCAGGAACAGTA 29272186 Query 86239 ATAACTGC-TTTATTAAT-AGGTTTTTGTAAATAT 86271 || || || ||| ||| | | || || ||||||| Sbjct 29272187 ATTACGGCATTTTTTACTGACGTATT--TAAATAT 29272219 >seq15 Length=10167229 Score = 372 bits (412), Expect = 2e-97 Identities = 840/1254 (67%), Gaps = 10/1254 (1%) Strand=Plus/Minus Query 281442 TACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTG 281501 ||||||| ||||| | ||||||||||| ||||||||||| || ||||| | ||||||| Sbjct 5278913 TACCATTAGCATCGATGTCAAATGTGACCTCAATTTGAGGTACACCTCTAGGTGCAGGTG 5278854 Query 281502 GGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCAC 281561 | || || | | ||| |||| ||| ||||||||||||| || | || || | Sbjct 5278853 GAATGCCAGTAAGTTCAAACTTTCCAAGAATATTATTATCTTTTGTCATAGCTCTCTCTC 5278794 Query 281562 CCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGG 281621 | ||| | | ||| || || ||| ||||||||| ||||| || || || | | Sbjct 5278793 CTTCGTATACTTGAATCAAGACGCCAGGTTGATTATCGGAATAGGTAGTGAAGGTTTGCG 5278734 Query 281622 ATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCTG 281681 || || || || || ||||| || | || | | | ||||| | ||||||||||| Sbjct 5278733 TTTGCTTGGTTGGTATGGTCGTGTTCCTCTTGATCAAAGTTGTCATCACACCACCAGCTG 5278674 Query 281682 TTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCAT 281741 |||||| ||| | || | ||||||||||| | ||| | | || |||| || || | Sbjct 5278673 TTTCTATACCCAATGACAATGGAGTGACATCCAGTAGCAACAGATCCTGAACTTCTTGAG 5278614 Query 281742 CAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAG 281801 | | ||| | |||||| || || | ||| || ||||| |||||||||||||||| Sbjct 5278613 ACTTGTCACCGTGCAAAATAGCGGCCTGTACAGCTGCGCCATAAGCAACAGCTTCATCAG 5278554 Query 281802 GATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACCT 281861 |||| | | || || | || ||| ||||||||||| | || | || | | || Sbjct 5278553 GATTGATCGATTTGTTCAATTCTTTTCCATTGAAAAAGTCCTGCAGTAATTTTTGAATCT 5278494 Query 281862 TAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTT 281921 | || || | | || || || ||||| || || || || || | ||| |||| | Sbjct 5278493 TTGGTATTCTGGTAGAACCACCGACTAAGACGATACTGTGAACATGAGCTTTGTCCATCT 5278434 Query 281922 TTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAA 281981 | | ||| ||| | |||||||| ||||| ||| ||| || | || | |||| Sbjct 5278433 TGGCATCTCTCAAAGCCTTTTCAACCGGTTCCAGAGTGCTTCTGAATAGATCCGCGCAAA 5278374 Query 281982 GTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAACAAAGA 282039 ||||||| ||| | ||||| || || ||| | || || ||||| || ||||| | ||| Sbjct 5278373 GTTCTTCAAATCTTGCTCTGGT--GATCGACGTGTAGAAATCAATCCCCTCGAAAAGAGA 5278316 Query 282040 ATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGC 282099 ||| | ||||| | | || || ||||| || | | || || | || || || Sbjct 5278315 ATCGATCTCAATACTGGCCTGTGTTGAAGAGCTTAAAGTTCTCTTCGCTCTCTCGCAAGC 5278256 Query 282100 TGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCAAATCTGTTTTATATTTTCTC 282157 || || | || || | ||| | || ||| | | || ||| | || ||||||||| Sbjct 5278255 AGTTCTCAATCGTCTAAGGGCCCT--CTTATTCGAACTTAAGTCTTTCTTGTATTTTCTC 5278198 Query 282158 TTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTA 282217 ||||| || | || | | || | |||||||| || |||||||| || | | Sbjct 5278197 TTGAACTCCTGGACGAAGTGATTCACCATCCGATTATCGAAGTCTTCACCACCAAGATGG 5278138 Query 282218 GTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACA 282277 |||| || | || | | |||| || | |||||||| | | ||| | | ||| Sbjct 5278137 GTATCGCCCGCTGTTGACTTCACTTCAAAGATGCCATCTTCGATGGTCAATATGGACACA 5278078 Query 282278 TCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTA 282337 ||| ||| ||||| |||| || || || ||||||||| |||| | |||||| Sbjct 5278077 TCAAAGGTGCCACCTCCCAAGTCGAAGATCAGTACATTCTTTTCACCTGCGGTTTTTTTA 5278018 Query 282338 TCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGA 282397 || | ||||| |||| || || || |||||||||||||| ||||| ||||| || | Sbjct 5278017 TCCAAGCCATAAGCAATCGCCGCCGCGGTTGGTTCATTAATTATTCTTAAAACGTTTAAG 5277958 Query 282398 CCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGA 282457 || || || ||| || ||||| || ||||| ||||| ||||| || |||||||| || Sbjct 5277957 CCTGCTATCGCTCCCGCGTCTTTGGTAGCTTGCCTTTGCGAATCATTGAAATATGCTGGG 5277898 Query 282458 ACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATT 282517 || ||||||||||||| || ||| |||||| | ||| || ||| |||| |||||| Sbjct 5277897 ACGGTAATAACGGCATTGGTAACTATTTTTCCTAAATAGGCTTCTGCAGTTTCCTTCATT 5277838 Query 282518 TTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTG-CTTGGATTCATTTTGATA 282576 || | | | ||| || || | || ||| || ||| | | ||| | |||| || ||| Sbjct 5277837 TTCGTGAGCACCATCGAAGACACTTCTTC-GGGGAAGAAAGTCTTCGTTTCACCTTTATA 5277779 Query 282577 TGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATTTCAT 282636 || || | | | |||||| ||| | || || || | |||||||||| |||||| Sbjct 5277778 CGAAACCTTGATCTTTGGTTTTCCTCCATCGTTCATCACCGTGAATGGCCAATGTTTCAT 5277719 Query 282637 ATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATC 282690 ||| ||| || || |||| || | ||| || |||| ||| ||||| Sbjct 5277718 ATCACTTTGTACTGTTGTATCATCGAAGCGACGACCGATCAATCTTTTCGCATC 5277665 Score = 129 bits (142), Expect = 4e-24 Identities = 140/186 (75%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 282690 CAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 282749 |||||||||| ||| | || || | ||| | |||| |||||| ||||| ||||||| Sbjct 5276926 CAAAAATAGTGTTGTTCGGGTTCATTGCGACCTGATTTTTGGCCGCATCGCCAATCAATC 5276867 Query 282750 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 282809 |||||| || || || | ||||| || || || ||||| ||||||||||| |||| Sbjct 5276866 TTTCTGTGTCCGTGAAGGCGACATAACTCGGTGTCGTTCGATTTCCTTGATCATTTGCAA 5276807 Query 282810 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 282869 | ||||||||||| |||| || | ||||| || ||| | |||| || |||||||||| Sbjct 5276806 TGATTTCAACTTTTCCATGCTGGAAAACACCCACGCAAGAATAAGTAGTGCCTAAATCAA 5276747 Query 282870 TACCAA 282875 | |||| Sbjct 5276746 TTCCAA 5276741 Score = 89.7 bits (98), Expect = 4e-12 Identities = 140/200 (70%), Gaps = 3/200 (2%) Strand=Plus/Plus Query 161567 GAATACATTTCTCCATGAGCATTTTCCATTGCATATTGGAAACCATAAGCACATTCAGCT 161626 |||||||||||| |||| |||||||||| ||| ||| |||||||| ||| || Sbjct 2293334 GAATACATTTCTGAATGAACATTTTCCATGGCAACTTGAAAACCATAGAAACAACGTGCC 2293393 Query 161627 TCTTTTATTTTCACAACATCAATAAGATTTTCTTTAATATTAGCATTAACAATACCATCA 161686 ||| |||||| || | | | ||| ||| || ||| |||||||||| |||||| Sbjct 2293394 TCTGTTATTTGTACTTCTTGACTAAATCGTTCAACAAGATTCTCATTAACAATTCCATCA 2293453 Query 161687 GCTGCCGCAAAAAATGCCAATACGTGCATAATAAAATTTCTATCATCATCGCTCAAATGA 161746 | || ||||||||||| || || || ||||||| | | ||| | | || | Sbjct 2293454 GAAGCTGCAAAAAATGCTAAGACATGAGATATAAAATGTTTTTCACTGGCAGTTAA---A 2293510 Query 161747 TTATTCCAATCATTCACATC 161766 |||||||||||| ||||| Sbjct 2293511 TTATTCCAATCAAATACATC 2293530 >seq3 Length=13234341 Score = 158 bits (174), Expect = 9e-33 Identities = 285/413 (69%), Gaps = 13/413 (3%) Strand=Plus/Minus Query 282426 CTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTT 282485 |||||||||||| ||| |||||||| || || ||||| | || |||| || |||| || Sbjct 1794285 CTTGTCTTTGTGCATCATTAAAATAAGCTGGTACAGTGACTACAGCATGAGTAACTTTTT 1794226 Query 282486 TTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTT 282545 | || | ||| || |||||||| ||||||||||| | | ||| | ||||||| || Sbjct 1794225 TGCCTAAATATGCTTCTGCTGTTTCTTTCATTTTACCAAGTACCATAGCAGAAATTTCTT 1794166 Query 282546 CTGGAGAATATTGCTTGGATTCATTTTGA--TATGATACTTCAAAATATGGTTTATTACC 282603 | || | | || ||| |||| | | || || ||| | || ||||| || Sbjct 1794165 CAGGTGCAAATACCTTTTCTTCACCATTAATTACCATTCTT--ATATGCGGTTTGCTATT 1794108 Query 282604 AACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAA 282663 | ||| ||||||||||| | |||| ||||| ||| ||| | | || | Sbjct 1794107 TTTTTCAATTACTTTAAATGGAAAGGATTTAATATCACGTTGTACAGTAGGATCTGACCA 1794048 Query 282664 ATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGC--- 282720 ||||| |||||||||||||| |||||||||| ||||| ||||| || || Sbjct 1794047 TTCTCTGCCAATTAATCGTTTGGCATCAAAAACTGTATTTTCAGGATT---TGTAGTCAA 1793991 Query 282721 TTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTG---TAAATGAAACATATGA 282777 ||||| || || ||||||||||| | |||| || | |||||| |||||||| Sbjct 1793990 TTGATTCTTTGCAGCATCTCCAATTAATCGTTCACCATCAGCAGTAAATGCCACATATGA 1793931 Query 282778 TGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTT 282830 ||| || | | ||| ||||||||||| || |||||||| || | ||||||| Sbjct 1793930 TGGTGTAATTCTATTTCCTTGATCATTAGCTATAATTTCTGCTCTTCCATTTT 1793878 Score = 141 bits (156), Expect = 7e-28 Identities = 172/234 (74%), Gaps = 3/234 (1%) Strand=Plus/Minus Query 282193 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 282252 ||| ||||||||||| || || | ||||| || ||| || |||| || | ||| Sbjct 1794644 ATCGAAATCTTCACCACCTAAATGAGTATCACCATTCGTTGCCACAACTTCAAATACTCC 1794585 Query 282253 ATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 282312 || |||| | | | | | |||||| || |||||||| | |||||||| | ||| Sbjct 1794584 ATTATCAATTGTAAGTAAACTGACATCAAAAGTACCACCACCTAAATCAAAAACTAATAC 1794525 Query 282313 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 282372 ||| ||||| |||| ||||||| | |||||| |||| |||||||| || ||||| Sbjct 1794524 ATTTTTTTCTCCATCTT---TTTTATCTAAACCATAAGCAATTGCAGCAGCTGTAGGTTC 1794468 Query 282373 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGC 282426 |||||||||||||| |||| ||| |||| ||| |||||||||||||||| || Sbjct 1794467 ATTAATAATTCTCATAACAACAAGTCCAGAAATAGTTCCTGCATCTTTAGTAGC 1794414 Score = 113 bits (124), Expect = 3e-19 Identities = 205/299 (69%), Gaps = 6/299 (2%) Strand=Plus/Minus Query 281653 AATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATC 281712 ||||| || ||||| | ||| ||| ||||||| | ||| | || ||| ||| ||||||| Sbjct 1795257 AATAAGCTTAGTCATTACACCTCCAACTGTTTCAATACCCATAGTAAGTGGATTGACATC 1795198 Query 281713 AACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAAT 281772 | || |||||| | | | | ||| || ||| ||| | | ||||||| | Sbjct 1795197 CAGAAGTACAATA----GCATCTGT--ATCTTGTTCCCCAGAAAGTACACCTGCTTGCAC 1795144 Query 281773 AGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATT 281832 ||||||||||||||||||||| || |||||||||| | | | ||| |||||| Sbjct 1795143 AGCAGCACCATATGCAACAGCCTCGTCAGGATTAATACCTCGTGATGGTTCTTTACCGCC 1795084 Query 281833 GAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATAC 281892 || || | | || | |||| || |||||||| | || || |||||||| | ||| Sbjct 1795083 AAAGAATTCTTTAACTAATTGTTGAACTTTAGGAATTCTAGTAGAACCTCCAACGAGTAC 1795024 Query 281893 AATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTT 281951 |||||||| || | | ||||| || | ||||| |||||||| | || |||| Sbjct 1795023 AATTTCATCTACATCTTTTTTATTCATATCAGAATCTTCCAAAACTTTCTGTACAGGTT 1794965 Score = 86.0 bits (94), Expect = 5e-11 Identities = 164/242 (68%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 281416 TTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAAT 281475 |||||| | |||| || | |||||| ||||| ||||| | || || || |||||||| Sbjct 1795585 TTTATCCTCAGCAGATACTTGAAGAATTCCATTAGCATCGATTTCGAAAGTAACTTCAAT 1795526 Query 281476 TTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATT 281535 ||| || | |||| | || ||||| || || | || |||| | || ||| || Sbjct 1795525 TTGTGGTATTCCTCGTGGTGCTGGTGGAATGCCAGTAAGATCAAATTTACCAAGAGGATG 1795466 Query 281536 ATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATT 281595 ||||||||| || | | |||||||| || | | ||| || || ||| | ||| || Sbjct 1795465 ATTATCTTTTGTCATTGGACGTTCACCTTCATATACTTGAATGGTTACTGTATGTTGGTT 1795406 Query 281596 ATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAAT 281655 ||||| ||| | ||| | | |||||||| |||||| || ||||||| || Sbjct 1795405 GTCTGATGCAGTAGAAAAGATTTGCGATTTTTTCGTCGGAATTACAGTATTTCTATAAAC 1795346 Query 281656 AA 281657 || Sbjct 1795345 AA 1795344 >seq110 Length=147519 Score = 125 bits (138), Expect = 5e-23 Identities = 125/162 (77%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 432278 AAGATTGAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATAT 432337 |||||| | ||| ||||||||| | || |||||||||||||||| || ||||||||| | Sbjct 59309 AAGATTAAAAGGAAAAGAAGGTAGAATACGAGGAAATTTGATGGGTAAACGTGTCGATTT 59250 Query 432338 GTCTGCACGTACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCC 432397 ||||| ||||| ||||||||| ||||||||||| | || || |||| ||||| || Sbjct 59249 TTCTGCTCGTACTGTTATTACTCCTGATCCTAATTTACGAATCGATCAAGTAGGTGTACC 59190 Query 432398 TCTCATTATTGCGAAAAATCTTACTTTTGACGAAATTGTAAC 432439 | | ||||| ||||| | || ||| ||||||||||| Sbjct 59189 TAGAAGCATTGCTCAAAATTTAACATTTCCTGAAATTGTAAC 59148 Score = 86.0 bits (94), Expect = 5e-11 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 435132 TGAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAAC 435191 |||||||| || || | |||| ||||||||||||| ||||| |||| ||| | ||||| Sbjct 57830 TGAATTTTATTTTCATGCTATGGGTGGTCGTGAAGGTCTTATTGATACTGCTGTAAAAAC 57771 Query 435192 TGCTGATACTGGTTATATTCAA 435213 ||| || ||||||||||||||| Sbjct 57770 TGCAGAAACTGGTTATATTCAA 57749 >seq6 Length=18472937 Score = 116 bits (128), Expect = 3e-20 Identities = 120/154 (78%), Gaps = 6/154 (4%) Strand=Plus/Minus Query 131183 GCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCATTAC 131242 || |||||||||||||| ||||||||| ||||||| |||| || |||| || ||| Sbjct 1951132 GCAACAATAGCATTTGGAATGGGTATTGATAAACCAAATGTACGATTTGTAATACAT--- 1951076 Query 131243 GGAGCTC--CCAAGAA-TATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGAT 131299 | |||| |||| | ||| ||||||||||||||||||| ||| | || ||||||||| Sbjct 1951075 GCAGCTTTACCAAAATCTATCGAAGGTTATTATCAAGAAAGTGGACGCGCTGGTCGTGAT 1951016 Query 131300 GGAGAAAAATCTTATTGTTATGCATTTTATAATT 131333 |||||||| | ||||| | ||||||||||| Sbjct 1951015 GGAGAAAATGCAGATTGTATTTTATTTTATAATT 1950982 >seq5 Length=14363272 Score = 86.0 bits (94), Expect = 5e-11 Identities = 119/166 (72%), Gaps = 3/166 (2%) Strand=Plus/Plus Query 91798 GAAGAAGACATTAAAAAAGCTTATAGAAAACTGGCTATCAAATATCATCCTGACAAAAAT 91857 || || || || |||||||| ||||||||| | || | |||||||||||||| |||||| Sbjct 6046139 GATGATGAAATAAAAAAAGCATATAGAAAATTAGCATTGAAATATCATCCTGATAAAAAT 6046198 Query 91858 AAAGGAAATCCTGAAGCCGAGGAAATGTTCAAGAAGATTAATCATGCCAATAGTATTTTG 91917 | ||| | ||| ||| || || | ||||| | || | | || || || | Sbjct 6046199 A---GAAGTGCTGGAGCAGAAGAGAAATTCAAAGAAATAGCTGAAGCTTATGAAGTTCTT 6046255 Query 91918 TCTAATTCTGAAAAGAGAAGAGTTTATGATCAATATGGTGAAGAAG 91963 ||| || || |||||||| ||| |||||| ||| ||| ||||||| Sbjct 6046256 TCTGATGCTAAAAAGAGAGAAGTCTATGATAAATTTGGAGAAGAAG 6046301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740369161386546