Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20mellifera_20[refseq_20GCF_5F000002195.4_202011-01-14] 5,321 sequences; 250,287,000 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq6 95.1 1e-14 >seq6 Length=18472937 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/209 (71%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 ||||||| || || ||||| || |||||||||| || | ||| |||| || || | Sbjct 4826311 AAATGTAGTGTTGATTCTTTTTGAATATTGTAAT--CCGAAAGTGTACGACCATCTTCCA 4826254 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 | || || || || |||| | | |||||| || |||||||| || ||||| || ||| Sbjct 4826253 GTTGTTTACCAGCAAAAATCAATCTCTGCTGATCTGGAGGGATACCCTCCTTATC-TTGA 4826195 Query 133573 TCTTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631 ||| | || | | | |||| || |||| | || || || | |||| |||||| Sbjct 4826194 ATTTTAGTTTTAACATTTTCAATAGTATCGGATGCTTCAACCTCCAAAGTGATGGTTTTT 4826135 Query 133632 CCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| |||||||| |||||||| ||||| Sbjct 4826134 CCGGTAAGAGTTTTGACGAAAATTTGCAT 4826106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483388646474040