Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20mellifera_20[refseq_20GCF_5F000002195.4_202011-01-14] 5,321 sequences; 250,287,000 total letters Query= NC_025462.1 Length=99730 Score E Sequences producing significant alignments: (Bits) Value seq8 91.5 9e-14 >seq8 Length=13546544 Score = 91.5 bits (100), Expect = 9e-14 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 19970 TGGAATCCTCATGATGTTGCAGATGTAGATTTACCACCTTGCCATACACTATTTCAATTC 20029 |||||||| |||| || || | | | |||||| ||||| ||| | ||||||| Sbjct 1794705 TGGAATCCAATTGATATTCCAAAAATGGCTTTACCTCCTTGTCATTGTTTCGTTCAATTT 1794764 Query 20030 TTTGTGAAAGATGGTAAATTATCTTGCCAGTTGTATCAACGAAGTGCTGACTTATTACTT 20089 | ||| | ||| ||||||| ||||| | |||||| ||||||| || | ||| Sbjct 1794765 TATGTAAGCAATGAAGAATTATCATGCCAACTTTATCAAAGAAGTGCGGATATGGGTCTT 1794824 Query 20090 GGTGTTCCATTTAATATTGCATCTTATGCTTTA 20122 ||||| ||||||||||||||||||||| ||||| Sbjct 1794825 GGTGTACCATTTAATATTGCATCTTATTCTTTA 1794857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318990512223371