Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20mellifera_20[refseq_20GCF_5F000002195.4_202011-01-14] 5,321 sequences; 250,287,000 total letters Query= NC_028834.1 Length=48216 Score E Sequences producing significant alignments: (Bits) Value seq3217 80.6 8e-11 >seq3217 Length=1517 Score = 80.6 bits (88), Expect = 8e-11 Identities = 65/79 (82%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 36268 TTGGTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTGCC 36327 ||||||||||| ||||||||||||| ||||| ||| ||| | ||| |||||| || Sbjct 1150 TTGGTCGGAGTGAAAGGATTCGAACCTTCGACCCCTTGCACCCCATGCAAGTGCGCTACC 1091 Query 36328 AGACTGCGCTACACTCCGA 36346 ||||||||| ||||||||| Sbjct 1090 AGACTGCGCCACACTCCGA 1072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154159858504756